RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 CLK4Q9HAZ1 481 aaKnown RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 POPDC3Q9HBV1 291 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 SAYSD1Q9NPB0 183 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 MED4Q9NPJ6 270 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 PRMT8Q9NR22 394 aaPredicted RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 GDF3Q9NR23 364 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 SLC22A11Q9NSA0 550 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 ZFP57Q9NU63 452 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 C20orf96Q9NUD7 363 aaPredicted RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 SPATS2LQ9NUQ6 558 aaKnown RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 MRGBPQ9NV56 204 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 NLE1Q9NVX2 485 aaPredicted RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 NKIRAS1Q9NYS0 192 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 TAS2R13Q9NYV9 303 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 AKAP7Q9P0M2 348 aaPredicted RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 LRFN1Q9P244 771 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 VPS18Q9P253 973 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 PSMC3IPQ9P2W1 217 aaPredicted RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 NFKBIL1Q9UBC1 381 aaPredicted RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 SPASTQ9UBP0 616 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 POLG2Q9UHN1 485 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 SLCO3A1Q9UIG8 710 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 INTS6Q9UL03 887 aaKnown RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 ACSL5Q9ULC5 683 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 GPR34Q9UPC5 381 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 NEU3Q9UQ49 428 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 CHKBQ9Y259 395 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 STK38LQ9Y2H1 464 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 R3HDM2Q9Y2K5 976 aaKnown RBP1.78□□□□□ -2.12
CCNC-208ENST00000519617 PPIL1Q9Y3C6 166 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 ZNF711Q9Y462 761 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 FADS3Q9Y5Q0 445 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 SNX10Q9Y5X0 201 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 RPS6KL1Q9Y6S9 549 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 COLEC10Q9Y6Z7 277 aa1.78□□□□□ -2.12
CCNC-208ENST00000519617 DOCK8Q8NF50 2099 aa1.78□□□□□ -2.13
CCNC-208ENST00000519617 NUP205Q92621 2012 aa1.78□□□□□ -2.13
CCNC-208ENST00000519617 LAMA3Q16787 3333 aa1.78□□□□□ -2.13
CCNC-208ENST00000519617 OBSL1O75147 1896 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 DENND4AQ7Z401 1863 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 CHD7Q9P2D1 2997 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 CHD9Q3L8U1 2897 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 NOTCH2Q04721 2471 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 UQCRHLA0A096LP55 91 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 A0A0A0MQY5 61 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 A0A0G2JNG1 304 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GOLGA8QA0A0J9YX86 632 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 A0A1W2PQF6 199 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GOLGA8OA6NCC3 632 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 NPIPB15A6NHN6 443 aaPredicted RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 HMGB1P1B2RPK0 211 aaPredicted RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 HNRNPCL2B2RXH8 293 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 E7ESA3 106 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GOLGA8NF8WBI6 632 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GOLGA8TH3BQL2 631 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GOLGA8MH3BSY2 632 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 K7ERQ8 282 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 TLR4O00206 839 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 TRAFD1O14545 582 aaPredicted RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 RASGRF2O14827 1237 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 VILLO15195 856 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 RAD51BO15315 384 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 MID1O15344 667 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 RGS16O15492 202 aaPredicted RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 LATO43561 262 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 ZBTB14O43829 449 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 KIF1CO43896 1103 aaKnown RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 SMIM24O75264 130 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 TCEA3O75764 348 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GAGE7O76087 117 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 SRP72O76094 671 aaKnown RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 RECQL5O94762 991 aaPredicted RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 CCNDBP1O95273 360 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 VAPBO95292 243 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 PIGNO95427 931 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 METTL18O95568 372 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 ACSL3O95573 720 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 DDAH2O95865 285 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 CD160O95971 181 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 CH25HO95992 272 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 MT-CYBP00156 380 aaPredicted RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 AGTP01019 485 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 TNFP01375 233 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 SLC4A1P02730 911 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 CATP04040 527 aaKnown RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 PCCBP05166 539 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 C8GP07360 202 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 DCNP07585 359 aaKnown RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 UQCRHP07919 91 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 RETP07949 1114 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 SNRPAP09012 282 aaKnown RBP1.77□□□□□ -2.13
CCNC-208ENST00000519617 RBP1P09455 135 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 NUDT17P0C025 328 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 SLC35G4P0C7Q5 338 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 ZSCAN5DPP0CG00 497 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GAGE12FP0CL80 117 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GAGE12GP0CL81 117 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 GAGE12IP0CL82 117 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 CKMT1AP12532 417 aa1.77□□□□□ -2.13
CCNC-208ENST00000519617 HLA-EP13747 358 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms