RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 LIPJQ5W064 366 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 CES4AQ5XG92 561 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 CYP20A1Q6UW02 462 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 B3GNT6Q6ZMB0 384 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 TRILQ7L0X0 811 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 OR4N5Q8IXE1 308 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 ST13P4Q8IZP2 240 aaPredicted RBP10.05□□□□□ -0.8
PVT1-208ENST00000519481 ZCCHC7Q8N3Z6 543 aaKnown RBP10.05□□□□□ -0.8
PVT1-208ENST00000519481 ACBD4Q8NC06 268 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 HUS1BQ8NHY5 278 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 RHEBL1Q8TAI7 183 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 NXNL1Q96CM4 212 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 FBXL20Q96IG2 436 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 ATOH8Q96SQ7 321 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 TREX2Q9BQ50 279 aaPredicted RBP10.05□□□□□ -0.8
PVT1-208ENST00000519481 ZNF559Q9BR84 538 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 CNPPD1Q9BV87 410 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 UCK2Q9BZX2 261 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 DMRT3Q9NQL9 472 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 PNPLA3Q9NST1 481 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 LYARQ9NX58 379 aaKnown RBP10.05□□□□□ -0.8
PVT1-208ENST00000519481 GRHL1Q9NZI5 618 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 ATG4BQ9Y4P1 393 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.05□□□□□ -0.8
PVT1-208ENST00000519481 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
PVT1-208ENST00000519481 ANKRD17O75179 2603 aaKnown RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 TRGV5A0A0B4J1U4 118 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 A0A1B0GVC2 190 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 CAPN14A8MX76 684 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 UGDHO60701 494 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 HCN1O60741 890 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 FAM155BO75949 473 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 TOXO94900 526 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 GABRA1P14867 456 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 MSX1P28360 303 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 SERPINB3P29508 390 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 CASQ1P31415 396 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 PIGAP37287 484 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 ARL1P40616 181 aaPredicted RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 ZFP36L2P47974 494 aaKnown RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 KRTAP10-9P60411 292 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 RPS13P62277 151 aaKnown RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 FOLH1Q04609 750 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 DLG1Q12959 904 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 MYBPHQ13203 477 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 PFKFB4Q16877 469 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 HYAL4Q2M3T9 481 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 C6orf163Q5TEZ5 329 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 RNF111Q6ZNA4 994 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 DMRTC2Q8IXT2 367 aaPredicted RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 TAGAPQ8N103 731 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 LIX1Q8N485 282 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 RPRMLQ8N4K4 120 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 FAM13CQ8NE31 585 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 FBXO25Q8TCJ0 367 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 KCTD4Q8WVF5 259 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 PPWD1Q96BP3 646 aaKnown RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 SPACA9Q96E40 222 aaPredicted RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 GAL3ST4Q96RP7 486 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 MTERF1Q99551 399 aaKnown RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 TTYH2Q9BSA4 534 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 SORBS1Q9BX66 1292 aaKnown RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 IGSF5Q9NSI5 407 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 ALKBH4Q9NXW9 302 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 TUBA8Q9NY65 449 aaPredicted RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 CNIH4Q9P003 139 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 B4GALT7Q9UBV7 327 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 KCNN3Q9UGI6 736 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 PYCARDQ9ULZ3 195 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 TSC22D4Q9Y3Q8 395 aa10.04□□□□□ -0.8
PVT1-208ENST00000519481 TNPO3Q9Y5L0 923 aaKnown RBP10.04□□□□□ -0.8
PVT1-208ENST00000519481 OR6C76A6NM76 312 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 H0YIV9 168 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 PLPP1O14494 284 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 PROM1O43490 865 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 GPR75O95800 540 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 C1QAP02745 245 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 IGKV3-11P04433 115 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 C2P06681 752 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 NR2F6P10588 404 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 IGFBP2P18065 325 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 PHBP35232 272 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 GMPRP36959 345 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 ALDH18A1P54886 795 aaKnown RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 HERVK_113P63132 956 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 ERVK-8P63133 956 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 FOXO1Q12778 655 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 GTF2H2Q13888 395 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 ZNF267Q14586 743 aaPredicted RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 SETDB1Q15047 1291 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 ACAP2Q15057 778 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 UAP1Q16222 522 aaPredicted RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 SPRED3Q2MJR0 410 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 ZNF791Q3KP31 576 aaPredicted RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 C1orf185Q5T7R7 199 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 MROH9Q5TGP6 573 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 HLA-DQA1Q5Y7H0 255 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 C18orf63Q68DL7 685 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 GTF2H2CQ6P1K8 395 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 TMEM200AQ86VY9 491 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms