RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 PLD1Q13393 1074 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 PUM1Q14671 1186 aaKnown RBP eCLIP12.92□□□□□ -0.34
PABPC1-208ENST00000519004 SWI5Q1ZZU3 235 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ATAT1Q5SQI0 421 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 PRAMEF19Q5SWL8 479 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 VASNQ6EMK4 673 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 ZNF687Q8N1G0 1237 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 OR4L1Q8NH43 312 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 EEF1AKMT1Q8WVE0 214 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 FDXACB1Q9BRP7 624 aaPredicted RBP12.92□□□□□ -0.34
PABPC1-208ENST00000519004 DOHHQ9BU89 302 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 IPPKQ9H8X2 491 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 PLXNA1Q9UIW2 1896 aa12.92□□□□□ -0.34
PABPC1-208ENST00000519004 SHISA3A0PJX4 238 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 RPP40O75818 363 aaKnown RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 NUDT7P0C024 238 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 AQP1P29972 269 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 SRP9P49458 86 aaKnown RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 DAOAP59103 153 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ERVK-25P63136 954 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 MAP4K2Q12851 820 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 CRHR2Q13324 411 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 VEZF1Q14119 521 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 FGL2Q14314 439 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 SGO1Q5FBB7 561 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 BCDIN3DQ7Z5W3 292 aaKnown RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 LAPTM4BQ86VI4 370 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 SIDT2Q8NBJ9 832 aaKnown RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 OR1M1Q8NGA1 313 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ZDHHC1Q8WTX9 485 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 FAM151AQ8WW52 585 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 LINGO1Q96FE5 620 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 MRPL48Q96GC5 212 aaKnown RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 PARK7Q99497 189 aaKnown RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ZNF251Q9BRH9 671 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 TSSK6Q9BXA6 273 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 NUDT4Q9NZJ9 180 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 EPHA6Q9UF33 1036 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 L7N2F9 121 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 TLR4O00206 839 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 SSNA1O43805 119 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 SLC19A2O60779 497 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 SOD1P00441 154 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 C1SP09871 688 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ZNF865P0CJ78 1059 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 RAB3BP20337 219 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ITGB8P26012 769 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 FGF9P31371 208 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ETV5P41161 510 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 PREPP48147 710 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 AFF1P51825 1210 aaKnown RBP12.91□□□□□ -0.34
PABPC1-208ENST00000519004 DSC2Q02487 901 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 MZT2AQ6P582 158 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 PAQR9Q6ZVX9 377 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 SLC16A13Q7RTY0 426 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 LRRTM3Q86VH5 581 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ADAMTS14Q8WXS8 1223 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 NELL1Q92832 810 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 FAM167AQ96KS9 214 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 FCRL1Q96LA6 429 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 RNF32Q9H0A6 362 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 NT5MQ9NPB1 228 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 PRDM9Q9NQV7 894 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 ENAMQ9NRM1 1142 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 NLGN3Q9NZ94 848 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 GSTK1Q9Y2Q3 226 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 CHST2Q9Y4C5 530 aa12.91□□□□□ -0.34
PABPC1-208ENST00000519004 TRBV23-1A0A0A0MS06 115 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 C2orf78A6NCI8 922 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 PRAMEF25A6NGN4 478 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 GCM2O75603 506 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 PEX11BO96011 259 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 PRKAR1BP31321 381 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 FEN1P39748 380 aaKnown RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 ZRANB3Q5FWF4 1079 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 AFTPHQ6ULP2 937 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 UNC5DQ6UXZ4 953 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 CLEC20AQ6ZU45 233 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 CHCHD4Q8N4Q1 142 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 ZNF527Q8NB42 609 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 ARL5BQ96KC2 179 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 TSSK3Q96PN8 268 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 UBL7Q96S82 380 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 IMP3Q9NV31 184 aaKnown RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 ZNF624Q9P2J8 865 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 GPN3Q9UHW5 284 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 RPL36Q9Y3U8 105 aaKnown RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 SLC22A7Q9Y694 548 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 KLRG2A4D1S0 409 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-208ENST00000519004 ANKDD1BA6NHY2 528 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 LRRC72A6NJI9 287 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 TLR5O60602 858 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 ATG12O94817 140 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 SIX6O95475 246 aa12.9□□□□□ -0.34
PABPC1-208ENST00000519004 HPXP02790 462 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms