RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 MTERF1Q99551 399 aaKnown RBP17.42■□□□□ 0.38
SDC2-202ENST00000518385 MAPKAP1Q9BPZ7 522 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 DOHHQ9BU89 302 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 NUAK2Q9H093 628 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 NEK6Q9HC98 313 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 THSD1Q9NS62 852 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 SLC6A13Q9NSD5 602 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 SLC23A2Q9UGH3 650 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 ZNF221Q9UK13 617 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 SLC17A4Q9Y2C5 497 aa17.42■□□□□ 0.38
SDC2-202ENST00000518385 A0A1W2PQU0 124 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 PDZK1P1A8MUH7 402 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 KCNK2O95069 426 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 SLC35G4P0C7Q5 338 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 FGL2Q14314 439 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 IQCCQ4KMZ1 466 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 PRAMEF14Q5SWL7 426 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 PRAMEF13Q5VWM6 474 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 SIX5Q8N196 739 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 METTL4Q8N3J2 472 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 STX19Q8N4C7 294 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 RPL3LQ92901 407 aaKnown RBP17.41■□□□□ 0.38
SDC2-202ENST00000518385 YIPF2Q9BWQ6 316 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 C6orf62Q9GZU0 229 aaPredicted RBP17.41■□□□□ 0.38
SDC2-202ENST00000518385 TPK1Q9H3S4 243 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 PELI2Q9HAT8 420 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 PCDHGB2Q9Y5G2 931 aa17.41■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3DA0A087WVF3 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3IA0A087WXS9 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3EA0A087X179 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3KA0A087X1G2 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3FA6NER0 549 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3LB9A6J9 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 IFNA14P01570 189 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3HP0C7X1 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TACR1P25103 407 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 RPL3P39023 403 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 RPS5P46782 204 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 PPP1R8Q12972 351 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 GAS6Q14393 721 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 SLBPQ14493 270 aaKnown RBP eCLIP17.4■□□□□ 0.38
SDC2-202ENST00000518385 ZNF362Q5T0B9 420 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3GQ6DHY5 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3CQ6IPX1 549 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 CCBE1Q6UXH8 406 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 RNF130Q86XS8 419 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 CCDC71Q8IV32 467 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 CCDC103Q8IW40 242 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TBC1D3Q8IZP1 549 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 C11orf65Q8NCR3 313 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 HMGB4Q8WW32 186 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 SMPDL3AQ92484 453 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 HTRA1Q92743 480 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 GGHQ92820 318 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 SCARF2Q96GP6 870 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 BARD1Q99728 777 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 NT5DC2Q9H857 520 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 ZNF282Q9UDV7 671 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 POU2F3Q9UKI9 436 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 WBP11Q9Y2W2 641 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 PIPSLA2A3N6 862 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 hCG_2039718K7EN88 272 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 CACNB4O00305 520 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 DSCR3O14972 297 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 SCN2BO60939 215 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 KRT75O95678 551 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 CDKN2CP42773 168 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 RGS6P49758 472 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 TPMTP51580 245 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 KCNJ10P78508 379 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 SLC13A2Q13183 592 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 DDX39BQ13838 428 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 DESI1Q6ICB0 168 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 OR4F3Q6IEY1 312 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 SLC44A2Q8IWA5 706 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 SIMC1Q8NDZ2 872 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 IL17RDQ8NFM7 739 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 OR5AR1Q8NGP9 310 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 CLHC1Q8NHS4 586 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 RAB11FIP5Q9BXF6 653 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 FOXQ1Q9C009 403 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 REXO4Q9GZR2 422 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 CHST8Q9H2A9 424 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 RUBCNLQ9H714 662 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 ZNF556Q9HAH1 456 aa17.4■□□□□ 0.38
SDC2-202ENST00000518385 ZBTB20Q9HC78 741 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 USP36Q9P275 1121 aaKnown RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 PCYT1BQ9Y5K3 369 aaPredicted RBP17.4■□□□□ 0.38
SDC2-202ENST00000518385 TNFRSF11BO00300 401 aa17.39■□□□□ 0.37
SDC2-202ENST00000518385 IDH3BO43837 385 aa17.39■□□□□ 0.37
SDC2-202ENST00000518385 CCNKO75909 580 aa17.39■□□□□ 0.37
SDC2-202ENST00000518385 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
SDC2-202ENST00000518385 DBTP11182 482 aaKnown RBP17.39■□□□□ 0.37
SDC2-202ENST00000518385 TIA1P31483 386 aaKnown RBP eCLIP17.39■□□□□ 0.371e-7■■■■□ 22.5
SDC2-202ENST00000518385 DDOSTP39656 456 aa17.39■□□□□ 0.37
SDC2-202ENST00000518385 SELENOWP63302 87 aa17.39■□□□□ 0.37
SDC2-202ENST00000518385 BNC1Q01954 994 aa17.39■□□□□ 0.37
SDC2-202ENST00000518385 SMN1Q16637 294 aaKnown RBP17.39■□□□□ 0.37
SDC2-202ENST00000518385 ARMCX4Q5H9R4 360 aa17.39■□□□□ 0.37
SDC2-202ENST00000518385 RSBN1Q5VWQ0 802 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms