RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 GPC1P35052 558 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NUDT1P36639 197 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NR4A2P43354 598 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MAP2K3P46734 347 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TM4SF4P48230 202 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CCR8P51685 355 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SGSHP51688 502 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NUDT6P53370 316 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MANFP55145 182 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TAS2R50P59544 299 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 AP3S2P59780 193 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RPS13P62277 151 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 BTG1P62324 171 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ACTC1P68032 377 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ACTA1P68133 377 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CYP4F2P78329 520 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 DAB2P98082 770 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 B4GALNT1Q00973 533 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 IFITM3Q01628 133 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SEMG2Q02383 582 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PTSQ03393 145 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF91Q05481 1191 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 EEF1A2Q05639 463 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 DPTQ07507 201 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C2orf80Q0P641 193 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ST3GAL3Q11203 375 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMEM115Q12893 351 aaPredicted RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PPP1R8Q12972 351 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TARDBPQ13148 414 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CRHR2Q13324 411 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC14A1Q13336 389 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TNK1Q13470 666 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TPBGQ13641 420 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GAS6Q14393 721 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLBPQ14493 270 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LARS2Q15031 903 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TRAM2Q15035 370 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SEC23BQ15437 767 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZSWIM7Q19AV6 140 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC5A12Q1EHB4 618 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 AAK1Q2M2I8 961 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TBRG1Q3YBR2 411 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PYDC2Q56P42 97 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF805Q5CZA5 627 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF311Q5JNZ3 666 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CEP78Q5JTW2 689 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CATSPEREQ5SY80 951 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C1QTNF12Q5T7M4 302 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF697Q5TEC3 545 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FAM46CQ5VWP2 391 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KHDRBS2Q5VWX1 349 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FAM71E1Q6IPT2 247 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SDE2Q6IQ49 451 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC27A4Q6P1M0 643 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CNKSR3Q6P9H4 555 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KLHL17Q6TDP4 642 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRSS55Q6UWB4 352 aaPredicted RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NXPE4Q6UWF7 544 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMIGD1Q6UXZ0 262 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 DLK2Q6UY11 383 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 QSOX2Q6ZRP7 698 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 USP30Q70CQ3 517 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CXXC5Q7LFL8 322 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NOXA1Q86UR1 476 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PDZD3Q86UT5 571 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TPRA1Q86W33 373 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LRRC28Q86X40 367 aaPredicted RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CCDC71Q8IV32 467 aaPredicted RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CCDC28AQ8IWP9 274 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PHC2Q8IXK0 858 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RDH10Q8IZV5 341 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NAGSQ8N159 534 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 EID2Q8N6I1 236 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LRRC17Q8N6Y2 441 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ARL14EPQ8N8R7 260 aaPredicted RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TTC16Q8NEE8 873 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 IL17RDQ8NFM7 739 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GPR156Q8NFN8 814 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR7G1Q8NGA0 311 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR52L1Q8NGH7 329 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR9A1PQ8NGU1 263 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR6K2Q8NGY2 324 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR2L2Q8NH16 312 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR52N1Q8NH53 320 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR52J3Q8NH60 311 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PIGXQ8TBF5 258 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMEM163Q8TC26 289 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RAET1EQ8TD07 263 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GNPDA2Q8TDQ7 276 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CREB3L4Q8TEY5 395 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C16orf78Q8WTQ4 265 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LINC01599Q8WXQ3 324 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SMPDL3AQ92484 453 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SGCDQ92629 289 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 AKAP1Q92667 903 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PMM1Q92871 262 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NEIL2Q969S2 332 aa3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GTPBP3Q969Y2 492 aaKnown RBP3.21□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MARVELD3Q96A59 401 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms