RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TMOD2Q9NZR1 351 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 KLHL8Q9P2G9 620 aaPredicted RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 CTNNA3Q9UI47 895 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 NOCTQ9UK39 431 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 RUVBL2Q9Y230 463 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 WDR83OSQ9Y284 106 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 ZNF510Q9Y2H8 683 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 MRPS28Q9Y2Q9 187 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 ANGPTL3Q9Y5C1 460 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CFAP65Q6ZU64 1925 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 FMN2Q9NZ56 1722 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CAMTA1Q9Y6Y1 1673 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CPSF1Q10570 1443 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 NCAPD2Q15021 1401 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 MYH14Q7Z406 1995 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 KIF24Q5T7B8 1368 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 ANKRD36BQ8N2N9 1353 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 KIF1BO60333 1816 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 A0A087WZY1 265 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 FAM230AA0A1W2PPH8 454 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 MACROD2A1Z1Q3 448 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 MAGEB16A2A368 324 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 CASTOR2A6NHX0 329 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 H0YIG0 161 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 GMFGO60234 142 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 ATP6V1G1O75348 118 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 SCGB2A1O75556 95 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 GAS8O95995 478 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 STAG3L1P0CL83 205 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 SMIM18P0DKX4 95 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 THRBP10828 461 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 PKLRP30613 574 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 SLC6A12P48065 614 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 NUMBP49757 651 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 CNN1P51911 297 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 HUNKP57058 714 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 ACTR1AP61163 376 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 LMO4P61968 165 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 SLC3A1Q07837 685 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 KLC1Q07866 573 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 DMPKQ09013 629 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 SPP2Q13103 211 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 CEBPEQ15744 281 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 CA9Q16790 459 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 PHKG1Q16816 387 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 UGT3A2Q3SY77 523 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 LRRC23Q53EV4 343 aaPredicted RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 TAF1BQ53T94 588 aaPredicted RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 ATAD3BQ5T9A4 648 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 PM20D1Q6GTS8 502 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 ZNF770Q6IQ21 691 aaPredicted RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 KLHL10Q6JEL2 608 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 BHLHB9Q6PI77 547 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 TRIM65Q6PJ69 517 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 FIP1L1Q6UN15 594 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 METTL7BQ6UX53 244 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 Q6ZSR9 355 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 C15orf52Q6ZUT6 534 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 ANKRD33Q7Z3H0 272 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 SH2D6Q7Z4S9 175 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 AMZ2Q86W34 360 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 KIRREL3Q8IZU9 778 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 RNF148Q8N7C7 305 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 SIDT2Q8NBJ9 832 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 NOA1Q8NC60 698 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 OR4K1Q8NGD4 311 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 OR4C3Q8NH37 302 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 DQX1Q8TE96 717 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 GGHQ92820 318 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 ZNF689Q96CS4 500 aaPredicted RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 ATOH8Q96SQ7 321 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 RBM4BQ9BQ04 359 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 TRIM51Q9BSJ1 452 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 TCHPQ9BT92 498 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 ANP32EQ9BTT0 268 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 TPPP3Q9BW30 176 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 FTHL17Q9BXU8 183 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 ZDHHC6Q9H6R6 413 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 HOMER3Q9NSC5 361 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 LAMP5Q9UJQ1 280 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 PLA2G4CQ9UP65 541 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 EXOGQ9Y2C4 368 aaKnown RBP2.78□□□□□ -1.96
HERC4-215ENST00000515753 KLK4Q9Y5K2 254 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 KNDC1Q76NI1 1749 aa2.78□□□□□ -1.96
HERC4-215ENST00000515753 KIAA1217Q5T5P2 1943 aa2.78□□□□□ -1.97
HERC4-215ENST00000515753 MYH15Q9Y2K3 1946 aa2.78□□□□□ -1.97
HERC4-215ENST00000515753 TNS2Q63HR2 1409 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 SMG6Q86US8 1419 aaKnown RBP2.77□□□□□ -1.97
HERC4-215ENST00000515753 ROCK2O75116 1388 aaKnown RBP2.77□□□□□ -1.97
HERC4-215ENST00000515753 PCDH11XQ9BZA7 1347 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 THSD7AQ9UPZ6 1657 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 SLC15A5A6NIM6 579 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 CCDC169A6NNP5 214 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 PRSS46E5RG02 174 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 UBXN8O00124 270 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 E2F3O00716 465 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 ARPC2O15144 300 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 TSC22D2O75157 780 aa2.77□□□□□ -1.97
HERC4-215ENST00000515753 SPAG6O75602 509 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms