RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DGAT2L6Q6ZPD8 337 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 CRLF3Q8IUI8 442 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 GOLGA6L1Q8N7Z2 621 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 APCDD1LQ8NCL9 501 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 OR14A16Q8NHC5 309 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 DAZLQ92904 295 aaKnown RBP13.02□□□□□ -0.33
USP46-209ENST00000514536 NCLNQ969V3 563 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 ZNF354BQ96LW1 612 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 FAIM2Q9BWQ8 316 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 CDCP1Q9H5V8 836 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 LRTM1Q9HBL6 345 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 C1orf109Q9NX04 203 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 TEKT2Q9UIF3 430 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 ANAPC2Q9UJX6 822 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 CES1P1Q9UKY3 287 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 PPIEQ9UNP9 301 aaKnown RBP13.02□□□□□ -0.33
USP46-209ENST00000514536 POLR3HQ9Y535 204 aaPredicted RBP13.02□□□□□ -0.33
USP46-209ENST00000514536 CSAG2Q9Y5P2 127 aa13.02□□□□□ -0.33
USP46-209ENST00000514536 TRBV11-1A0A0K0K1C0 115 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 PIP5K1BO14986 540 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 OR10H2O60403 315 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 MAN1A2O60476 641 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 F10P00742 488 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 IL3P08700 152 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 COX7A2P14406 83 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 ST13P50502 369 aaKnown RBP13.01□□□□□ -0.33
USP46-209ENST00000514536 CLCN2P51788 898 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 XKP51811 444 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 PLIN5Q00G26 463 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 KIAA0040Q15053 153 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 NR6A1Q15406 480 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 ZNF750Q32MQ0 723 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 PLEKHN1Q494U1 663 aaPredicted RBP13.01□□□□□ -0.33
USP46-209ENST00000514536 ACER2Q5QJU3 275 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 SLC48A1Q6P1K1 146 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 RNF165Q6ZSG1 346 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 RPS19BP1Q86WX3 136 aaKnown RBP13.01□□□□□ -0.33
USP46-209ENST00000514536 ST13P4Q8IZP2 240 aaPredicted RBP13.01□□□□□ -0.33
USP46-209ENST00000514536 ZNF321PQ8N8H1 164 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 MORN4Q8NDC4 146 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 CATSPER1Q8NEC5 780 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 VMP1Q96GC9 406 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 NPAS2Q99743 824 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 SH3GL2Q99962 352 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 DEFB126Q9BYW3 111 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 OR8D2Q9GZM6 311 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 ILKAPQ9H0C8 392 aaPredicted RBP13.01□□□□□ -0.33
USP46-209ENST00000514536 LUZP4Q9P127 313 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 HEY2Q9UBP5 337 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 ZNF223Q9UK11 482 aaPredicted RBP13.01□□□□□ -0.33
USP46-209ENST00000514536 PSME2Q9UL46 239 aa13.01□□□□□ -0.33
USP46-209ENST00000514536 DOCK10Q96BY6 2186 aa13□□□□□ -0.33
USP46-209ENST00000514536 DYTNA2CJ06 578 aa13□□□□□ -0.33
USP46-209ENST00000514536 SKAP2O75563 359 aaPredicted RBP13□□□□□ -0.33
USP46-209ENST00000514536 ERAL1O75616 437 aaKnown RBP13□□□□□ -0.33
USP46-209ENST00000514536 SASH3O75995 380 aa13□□□□□ -0.33
USP46-209ENST00000514536 DDAH2O95865 285 aa13□□□□□ -0.33
USP46-209ENST00000514536 WDPCPO95876 746 aa13□□□□□ -0.33
USP46-209ENST00000514536 SLC35E2P0CK97 266 aa13□□□□□ -0.33
USP46-209ENST00000514536 PRPH2P23942 346 aa13□□□□□ -0.33
USP46-209ENST00000514536 ARG2P78540 354 aa13□□□□□ -0.33
USP46-209ENST00000514536 BST1Q10588 318 aa13□□□□□ -0.33
USP46-209ENST00000514536 ZNF267Q14586 743 aaPredicted RBP13□□□□□ -0.33
USP46-209ENST00000514536 MEP1AQ16819 746 aa13□□□□□ -0.33
USP46-209ENST00000514536 SLC6A19Q695T7 634 aa13□□□□□ -0.33
USP46-209ENST00000514536 NOXRED1Q6NXP6 359 aa13□□□□□ -0.33
USP46-209ENST00000514536 PRICKLE2Q7Z3G6 844 aa13□□□□□ -0.33
USP46-209ENST00000514536 SLC5A8Q8N695 610 aa13□□□□□ -0.33
USP46-209ENST00000514536 ZNF781Q8N8C0 355 aa13□□□□□ -0.33
USP46-209ENST00000514536 CDC26Q8NHZ8 85 aa13□□□□□ -0.33
USP46-209ENST00000514536 FAM76AQ8TAV0 307 aa13□□□□□ -0.33
USP46-209ENST00000514536 SLC2A12Q8TD20 617 aa13□□□□□ -0.33
USP46-209ENST00000514536 THAP3Q8WTV1 239 aaPredicted RBP13□□□□□ -0.33
USP46-209ENST00000514536 HAS2Q92819 552 aa13□□□□□ -0.33
USP46-209ENST00000514536 SENP5Q96HI0 755 aaPredicted RBP13□□□□□ -0.33
USP46-209ENST00000514536 SORT1Q99523 831 aa13□□□□□ -0.33
USP46-209ENST00000514536 PELOQ9BRX2 385 aaKnown RBP13□□□□□ -0.33
USP46-209ENST00000514536 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
USP46-209ENST00000514536 RAP2CQ9Y3L5 183 aa13□□□□□ -0.33
USP46-209ENST00000514536 TLN1Q9Y490 2541 aaKnown RBP12.99□□□□□ -0.33
USP46-209ENST00000514536 NPIPB8E9PQR5 432 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 LSM1O15116 133 aaKnown RBP12.99□□□□□ -0.33
USP46-209ENST00000514536 CPMP14384 443 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 DRD2P14416 443 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 FEN1P39748 380 aaKnown RBP12.99□□□□□ -0.33
USP46-209ENST00000514536 CASRP41180 1078 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 RPL14P50914 215 aaKnown RBP12.99□□□□□ -0.33
USP46-209ENST00000514536 ZNF763Q0D2J5 394 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 C2orf80Q0P641 193 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 GALNTL6Q49A17 601 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 RFTN2Q52LD8 501 aaPredicted RBP12.99□□□□□ -0.33
USP46-209ENST00000514536 FAM180BQ6P0A1 224 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 Q6ZS92 163 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 BEST3Q8N1M1 668 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 OR1N1Q8NGS0 311 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 ZNF721Q8TF20 911 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 RIT1Q92963 219 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 KLHL29Q96CT2 875 aa12.99□□□□□ -0.33
USP46-209ENST00000514536 METTL2AQ96IZ6 378 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms