RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 UBP1Q9NZI7 540 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 NUDT4Q9NZJ9 180 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 GMEB2Q9UKD1 530 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 OARD1Q9Y530 152 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 PEX16Q9Y5Y5 336 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 IGLV3-16A0A075B6K0 115 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 A0A1B0GTQ1 180 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 DFFAO00273 331 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CD3EAPO15446 510 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 PLRG1O43660 514 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 TNFRSF21O75509 655 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 KRT6AP02538 564 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 KRT6BP04259 564 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 PRSS56P0CW18 603 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ITGB6P18564 788 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 C21orf33P30042 268 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CALCRP30988 508 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CLCNKAP51800 687 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CSTF1Q05048 431 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 BCL2L1Q07817 233 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SGCGQ13326 291 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 PTCHD3Q3KNS1 767 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SAXO2Q658L1 398 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 OR2T5Q6IEZ7 315 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 LIN54Q6MZP7 749 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 NCEH1Q6PIU2 408 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 IL27RAQ6UWB1 636 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 GDPD4Q6W3E5 623 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ERN2Q76MJ5 926 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ZSWIM9Q86XI8 627 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 THNSL2Q86YJ6 484 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 OR2T12Q8NG77 320 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 OR2T29Q8NH02 315 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 TRIM63Q969Q1 353 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ECHDC3Q96DC8 303 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CRELD1Q96HD1 420 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SENP5Q96HI0 755 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 LCORQ96JN0 433 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 LYSMD1Q96S90 227 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ADGRE3Q9BY15 652 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 BTBD1Q9H0C5 482 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 OR51E2Q9H255 320 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 C1orf109Q9NX04 203 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SH3D21A4FU49 640 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 INSIG1O15503 277 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 HOXD4P09016 255 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 HBQ1P09105 142 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 PAMP19021 973 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 GTF2E2P29084 291 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 HMGCLP35914 325 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 RPS19P39019 145 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 MECP2P51608 486 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 RPP38P78345 283 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF33BQ06732 778 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SLC10A7Q0GE19 358 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 GTDC1Q4AE62 458 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 PLA1AQ53H76 456 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 GALNT10Q86SR1 603 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ZBTB46Q86UZ6 589 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 GHDCQ8N2G8 530 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 AFAP1L2Q8N4X5 818 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CLDN22Q8N7P3 220 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 OR2A12Q8NGT7 310 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 STAG3L4Q8TBR4 150 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 HSD17B8Q92506 261 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 MRGPRX1Q96LB2 322 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SORCS2Q96PQ0 1159 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 B3GAT2Q9NPZ5 323 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 EXD2Q9NVH0 621 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 NDUFAF4Q9P032 175 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ADGRE2Q9UHX3 823 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SH3BGRL2Q9UJC5 107 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CLEC4EQ9ULY5 219 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 RBMX2Q9Y388 322 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 HS3ST3A1Q9Y663 406 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 TECTAO75443 2155 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 J3KR12 359 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 DCNP07585 359 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 GNSP15586 552 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 HLA-DPA1P20036 260 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 IGFBP5P24593 272 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 KCNK10P57789 538 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SEMG2Q02383 582 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SMAD1Q15797 465 aaKnown RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 C2orf27AQ580R0 203 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 KIAA0895LQ68EN5 471 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 XKRXQ6PP77 449 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CORO6Q6QEF8 472 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 PAGE2Q7Z2X7 111 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 CIR1Q86X95 450 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 PIANPQ8IYJ0 282 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 MCFD2Q8NI22 146 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF775Q96BV0 537 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 FAM129BQ96TA1 746 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 DGCR6LQ9BY27 220 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 KLHL25Q9H0H3 589 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 KCNN2Q9H2S1 579 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 SUV39H2Q9H5I1 410 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 NARFLQ9H6Q4 476 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms