RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 C19orf25Q9UFG5 118 aaPredicted RBP9.55□□□□□ -0.88
NEDD9-214ENST00000513989 C3orf18Q9UK00 162 aa9.55□□□□□ -0.88
NEDD9-214ENST00000513989 CROTQ9UKG9 612 aa9.55□□□□□ -0.88
NEDD9-214ENST00000513989 UTS2RQ9UKP6 389 aa9.55□□□□□ -0.88
NEDD9-214ENST00000513989 PCDHGB4Q9UN71 923 aa9.55□□□□□ -0.88
NEDD9-214ENST00000513989 ENTPD4Q9Y227 616 aa9.55□□□□□ -0.88
NEDD9-214ENST00000513989 PTRH2Q9Y3E5 179 aaKnown RBP9.55□□□□□ -0.88
NEDD9-214ENST00000513989 FAM234BA2RU67 622 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 GLOD5A6NK44 160 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 GABRR3A8MPY1 467 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 SCAMP2O15127 329 aaKnown RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 PGRMC2O15173 223 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 EFSO43281 561 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 OR10H2O60403 315 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 TBX19O60806 448 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 ERAL1O75616 437 aaKnown RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 CDC123O75794 336 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 IFNA16P05015 189 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 FURINP09958 794 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 TNNI3P19429 210 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 TACR1P25103 407 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 NTSP30990 170 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 KIR3DL1P43629 444 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 POLR2JP52435 117 aaKnown RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 NME5P56597 212 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 TMPRSS3P57727 454 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 KCNK10P57789 538 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 UFM1P61960 85 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 MC1RQ01726 317 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 CLN3Q13286 438 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 DNASE1L3Q13609 305 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 ERV3-1Q14264 604 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 PTGR1Q14914 329 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 MAPRE2Q15555 327 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 AGKQ53H12 422 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 C6orf163Q5TEZ5 329 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 LCN10Q6JVE6 187 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 COX15Q7KZN9 410 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 DTX1Q86Y01 620 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 TICAM1Q8IUC6 712 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 ZC3H7AQ8IWR0 971 aaKnown RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 PRSS58Q8IYP2 241 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 ENDOVQ8N8Q3 282 aaKnown RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 OR2Y1Q8NGV0 311 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 CLHC1Q8NHS4 586 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 DNAJB14Q8TBM8 379 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 CT55Q8WUE5 264 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 EXOSC8Q96B26 276 aaKnown RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 TESCQ96BS2 214 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 KLHL29Q96CT2 875 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 COQ8BQ96D53 544 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 ZNF764Q96H86 408 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 EGLN2Q96KS0 407 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 IP6K3Q96PC2 410 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 CRB3Q9BUF7 120 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 ALOXE3Q9BYJ1 711 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 BHLHE41Q9C0J9 482 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 SOX17Q9H6I2 414 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 RMND5AQ9H871 391 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 AKIRIN1Q9H9L7 192 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 SLC35C2Q9NQQ7 365 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 SLC22A11Q9NSA0 550 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 TEX10Q9NXF1 929 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 ATP6V1HQ9UI12 483 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 PCDHGA6Q9Y5G7 932 aa9.54□□□□□ -0.88
NEDD9-214ENST00000513989 COPG1Q9Y678 874 aaKnown RBP9.54□□□□□ -0.88
NEDD9-214ENST00000513989 LRRK2Q5S007 2527 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 IDSB3KWA1 339 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 FCHO1O14526 889 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CFLARO15519 480 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 ALOX12BO75342 701 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 RECKO95980 971 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 SLC35E2P0CK97 266 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 C8orf89P0DMQ9 161 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 PORP16435 677 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-214ENST00000513989 GPX3P22352 226 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 MANFP55145 182 aaKnown RBP9.53□□□□□ -0.88
NEDD9-214ENST00000513989 SNRPNP63162 240 aaKnown RBP9.53□□□□□ -0.88
NEDD9-214ENST00000513989 RHDQ02161 417 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 LY6DQ14210 128 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 PAOXQ6QHF9 649 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 FAM198BQ6UWH4 519 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CLNKQ7Z7G1 428 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 LAPTM4BQ86VI4 370 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 RIMKLAQ8IXN7 391 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 KRTCAP2Q8N6L1 136 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 OR8J2Q8NGG1 315 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 ZFP28Q8NHY6 868 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 TSPEARQ8WU66 669 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CMTM5Q96DZ9 223 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 ZBED6CLQ96FA7 236 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-214ENST00000513989 MARK4Q96L34 752 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 DGAT2Q96PD7 388 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 OR52E6Q96RD3 313 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CSF3RQ99062 836 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 TUBB6Q9BUF5 446 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 DUSP26Q9BV47 211 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 VN1R1Q9GZP7 353 aa9.53□□□□□ -0.88
NEDD9-214ENST00000513989 CLMPQ9H6B4 373 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms