RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ZNF682O95780 498 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PROS1P07225 676 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 FHP07954 510 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 UBTFL6P0CB48 400 aaPredicted RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 ITGA2P17301 1181 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 FPR1P21462 350 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 BCKDHBP21953 392 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 TLX1P31314 330 aaPredicted RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 DNAJA1P31689 397 aaKnown RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 CAPGP40121 348 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 CAPZBP47756 277 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PXNP49023 591 aaPredicted RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 RPS6KA3P51812 740 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 AFF3P51826 1226 aaKnown RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 EMP3P54852 163 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 LIM2P55344 173 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 FOXK2Q01167 660 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 RUNX2Q13950 521 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 GNA13Q14344 377 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 NR1D2Q14995 579 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 TCEA2Q15560 299 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PRTGQ2VWP7 1150 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 C14orf28Q4W4Y0 310 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 IFI44LQ53G44 452 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 C18orf63Q68DL7 685 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 FRMPD2BQ6IN97 320 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 TBPL2Q6SJ96 375 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 CEACAM20Q6UY09 585 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 ZNF438Q7Z4V0 828 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 WDR5BQ86VZ2 330 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 SFTPA2Q8IWL1 248 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 OR4N4Q8N0Y3 316 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 ARHGEF39Q8N4T4 335 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 DNAJC22Q8N4W6 341 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 HORMAD2Q8N7B1 307 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 C19orf47Q8N9M1 422 aaKnown RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 NFKBIDQ8NI38 313 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 RASSF5Q8WWW0 418 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 UCN3Q969E3 161 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 TAMM41Q96BW9 452 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 TCTN2Q96GX1 697 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 ZNF347Q96SE7 839 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 EPYCQ99645 322 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 MACROD1Q9BQ69 325 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 YTHDF1Q9BYJ9 559 aaKnown RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 IL21RQ9HBE5 538 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 C3orf14Q9HBI5 128 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PRMT8Q9NR22 394 aaPredicted RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 PNPLA3Q9NST1 481 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 FBXW2Q9UKT8 454 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 ACSL6Q9UKU0 697 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 BAG5Q9UL15 447 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 DOLKQ9UPQ8 538 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 MAP4K5Q9Y4K4 846 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 ZNF780BQ9Y6R6 833 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 SPACA6W5XKT8 324 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PCDH15Q96QU1 1955 aa7.9□□□□□ -1.15
RNF4-220ENST00000513578 M0QX08 132 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 HMGN4O00479 90 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MT-ND1P03886 318 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 THRBP10828 461 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 TDGF1P13385 188 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 PVRP15151 417 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 ST6GAL1P15907 406 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 CPN2P22792 545 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MAOBP27338 520 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 GPC1P35052 558 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 CTSKP43235 329 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 GABRA4P48169 554 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 KHKP50053 298 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 NCBP2P52298 156 aaKnown RBP eCLIP7.89□□□□□ -1.155e-11■■■□□ 14.7
RNF4-220ENST00000513578 ARHGDIAP52565 204 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 HMGA2P52926 109 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MAZP56270 477 aaKnown RBP7.89□□□□□ -1.15
RNF4-220ENST00000513578 C21orf59P57076 290 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SKP1P63208 163 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 PRR5P85299 388 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 VLDLRP98155 873 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 ZXDAP98168 799 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MYBPC1Q00872 1141 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 HSPB3Q12988 150 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 IL18R1Q13478 541 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SPIDRQ14159 915 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MAPK11Q15759 364 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 INAVAQ3KP66 663 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 SPDYE7PQ495Y7 208 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 GARNL3Q5VVW2 1013 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 TTC23Q5W5X9 447 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 ANGPTL8Q6UXH0 198 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MED25Q71SY5 747 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 TSEN54Q7Z6J9 526 aaKnown RBP7.89□□□□□ -1.15
RNF4-220ENST00000513578 STK32CQ86UX6 486 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 ST13P4Q8IZP2 240 aaPredicted RBP7.89□□□□□ -1.15
RNF4-220ENST00000513578 LGI4Q8N135 537 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 DEFB119Q8N690 84 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 CSNK1A1LQ8N752 337 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 OR4K14Q8NGD5 310 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 OR5AK3PQ8NH89 298 aa7.89□□□□□ -1.15
RNF4-220ENST00000513578 MAGEE2Q8TD90 523 aaPredicted RBP7.89□□□□□ -1.15
RNF4-220ENST00000513578 ADAMTS18Q8TE60 1221 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms