RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TRAPPC9Q96Q05 1148 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 HBEGFQ99075 208 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 THTPAQ9BU02 230 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 C1orf50Q9BV19 199 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 CHRNA10Q9GZZ6 450 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 RAB33BQ9H082 229 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 EPB41L1Q9H4G0 881 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 GSX1Q9H4S2 264 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 DENND2DQ9H6A0 471 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 MYNNQ9NPC7 610 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 PRDM9Q9NQV7 894 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 ENAMQ9NRM1 1142 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 PRDM4Q9UKN5 801 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 DLGAP4Q9Y2H0 992 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 AP1M2Q9Y6Q5 423 aa9.89□□□□□ -0.83
PDLIM5-217ENST00000512274 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 TRBV5-3A0A0A0MS03 114 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 NR5A2O00482 541 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ERN1O75460 977 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 CIB2O75838 187 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 SCELO95171 688 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 VIPP01282 170 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 HOXB9P17482 250 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 DDX5P17844 614 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 NELFEP18615 380 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 TRPC1P48995 793 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 RPS15AP62244 130 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 RPS13P62277 151 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 RAE1P78406 368 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ZNF763Q0D2J5 394 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 PDE7AQ13946 482 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 PTGR1Q14914 329 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 VPS26BQ4G0F5 336 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 KHDRBS2Q5VWX1 349 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 DLEU7Q6UYE1 221 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 TMEM26Q6ZUK4 368 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 PAGE2Q7Z2X7 111 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 R3HCC1LQ7Z5L2 792 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 TMEM126BQ8IUX1 230 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 CARFQ8N187 725 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ANKRD53Q8N9V6 530 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 SRFBP1Q8NEF9 429 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 TRPV3Q8NET8 790 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 CREB3L4Q8TEY5 395 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 KLHL6Q8WZ60 621 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 RSC1A1Q92681 617 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 POP5Q969H6 163 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ZUFSPQ96AP4 578 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 LRRC58Q96CX6 371 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 COQ8BQ96D53 544 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ASB9Q96DX5 294 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 MTERF1Q99551 399 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 CENPKQ9BS16 269 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ZNF717Q9BY31 904 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 SPNS1Q9H2V7 528 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 SRMSQ9H3Y6 488 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 DCLRE1BQ9H816 532 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 MRPS30Q9NP92 439 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 FAM120CQ9NX05 1096 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ATP6V1HQ9UI12 483 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 TCFL5Q9UL49 500 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 PLAGL1Q9UM63 463 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 AKAP9Q99996 3911 aa9.88□□□□□ -0.83
PDLIM5-217ENST00000512274 ANKDD1BA6NHY2 528 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 C2orf74A8MZ97 194 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 C19orf84I3L1E1 186 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 TOX3O15405 576 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 SCN2BO60939 215 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 FKBP6O75344 327 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 BCAS2O75934 225 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 ETHE1O95571 254 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 ME2P23368 584 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 SLC6A2P23975 617 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 OTX2P32243 289 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 GCKP35557 465 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 EEFSECP57772 596 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 PPP1CAP62136 330 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 BNIP2Q12982 314 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 PWP1Q13610 501 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 GPR18Q14330 331 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 SGO1Q5FBB7 561 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 PRAMEF17Q5VTA0 474 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 FAM219BQ5XKK7 198 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 KLHL35Q6PF15 583 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 Q6ZS92 163 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 COMMD6Q7Z4G1 85 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 PRSS42Q7Z5A4 293 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 PAQR7Q86WK9 346 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 TRIM48Q8IWZ4 208 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 MFSD9Q8NBP5 474 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 SLC38A9Q8NBW4 561 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 OR52E4Q8NGH9 312 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 FAR1Q8WVX9 515 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 GTF2H4Q92759 462 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 RELTQ969Z4 430 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 DUS3LQ96G46 650 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 CCDC120Q96HB5 630 aa9.87□□□□□ -0.83
PDLIM5-217ENST00000512274 PRPF18Q99633 342 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms