RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.25□□□□□ -0.451e-18■□□□□ 8.8
HMGB2-205ENST00000511316 NCKAP1Q9Y2A7 1128 aa12.25□□□□□ -0.45
HMGB2-205ENST00000511316 PCDH15Q96QU1 1955 aa12.25□□□□□ -0.45
HMGB2-205ENST00000511316 A0A1W2PPC4 97 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 FAM25AB3EWG3 89 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 FAM25CB3EWG5 89 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 FAM25GB3EWG6 89 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 C1QTNF3-AMACRE9PGA6 284 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 H0YIV9 168 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 IDH3BO43837 385 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 ADORA3P0DMS8 318 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 DBTP11182 482 aaKnown RBP12.24□□□□□ -0.45
HMGB2-205ENST00000511316 TIMP2P16035 220 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 ITGB7P26010 798 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 RRM2P31350 389 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 PPP1R8Q12972 351 aaKnown RBP12.24□□□□□ -0.45
HMGB2-205ENST00000511316 SLC13A2Q13183 592 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 FGL2Q14314 439 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 ZNF630Q2M218 657 aaPredicted RBP12.24□□□□□ -0.45
HMGB2-205ENST00000511316 IQCCQ4KMZ1 466 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 ZNF805Q5CZA5 627 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 KIAA0895LQ68EN5 471 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 TRIM40Q6P9F5 258 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 ANKRD46Q86W74 232 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 NATD1Q8N6N6 113 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 SIMC1Q8NDZ2 872 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 GOT1L1Q8NHS2 421 aaPredicted RBP12.24□□□□□ -0.45
HMGB2-205ENST00000511316 RPL3LQ92901 407 aaKnown RBP12.24□□□□□ -0.45
HMGB2-205ENST00000511316 ECHDC3Q96DC8 303 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 WDFY2Q96P53 400 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 CHST8Q9H2A9 424 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 TMEM38AQ9H6F2 299 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 ZDHHC6Q9H6R6 413 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 SACM1LQ9NTJ5 587 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 DLL3Q9NYJ7 618 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 GPRC5BQ9NZH0 403 aa12.24□□□□□ -0.45
HMGB2-205ENST00000511316 SLC35F4A4IF30 521 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 GFYI3L273 518 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 WNT1P04628 370 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 ADRB3P13945 408 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 BPIP17213 487 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 EPORP19235 508 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 ENDOUP21128 410 aaKnown RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 FUT4P22083 530 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 CD27P26842 260 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 AOAHP28039 575 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 DDOSTP39656 456 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 RECQLP46063 649 aaPredicted RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 CCR5P51681 352 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 HMGA2P52926 109 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 IRF8Q02556 426 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 RUNX1T1Q06455 604 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 RGNQ15493 299 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 SMN1Q16637 294 aaKnown RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 CLPPQ16740 277 aaPredicted RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 UGT8Q16880 541 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 SYT16Q17RD7 645 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 ZNF284Q2VY69 593 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TRIM61Q5EBN2 209 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 LRRC66Q68CR7 880 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 DESI1Q6ICB0 168 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 HEATR4Q86WZ0 1026 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 CCDC71Q8IV32 467 aaPredicted RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 LKAAEAR1Q8TD35 194 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 GANCQ8TET4 914 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 COQ8BQ96D53 544 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 DKK3Q9UBP4 350 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 STUB1Q9UNE7 303 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 PPIL1Q9Y3C6 166 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 CABIN1Q9Y6J0 2220 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3DA0A087WVF3 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3IA0A087WXS9 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3EA0A087X179 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3KA0A087X1G2 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 A0A1W2PR77 199 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TSPAN11A1L157 253 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3FA6NER0 549 aaPredicted RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3LB9A6J9 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TRIM3O75382 744 aaPredicted RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3HP0C7X1 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 WNT3P56703 355 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 OR2B6P58173 313 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 ST3GAL4Q11206 333 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 CHRNA6Q15825 494 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 CDKN3Q16667 212 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 WDR45BQ5MNZ6 344 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 GCNT6Q5T4J0 391 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3GQ6DHY5 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3CQ6IPX1 549 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 GRHL2Q6ISB3 625 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 GDPD4Q6W3E5 623 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 VTCN1Q7Z7D3 282 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 RAB43Q86YS6 212 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 TBC1D3Q8IZP1 549 aaPredicted RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 OR4C15Q8NGM1 316 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 KIAA1143Q96AT1 154 aaPredicted RBP12.23□□□□□ -0.45
HMGB2-205ENST00000511316 PYCR2Q96C36 320 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 MTERF3Q96E29 417 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 APIPQ96GX9 242 aa12.23□□□□□ -0.45
HMGB2-205ENST00000511316 PPP1R16AQ96I34 528 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms