RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SH3GL2Q99962 352 aa21.02■□□□□ 0.96
SMAD5-207ENST00000511116 PHACTR1Q9C0D0 580 aa21.02■□□□□ 0.96
SMAD5-207ENST00000511116 LIME1Q9H400 295 aa21.02■□□□□ 0.96
SMAD5-207ENST00000511116 MS4A12Q9NXJ0 267 aa21.02■□□□□ 0.96
SMAD5-207ENST00000511116 CD274Q9NZQ7 290 aa21.02■□□□□ 0.96
SMAD5-207ENST00000511116 CRIM1Q9NZV1 1036 aa21.02■□□□□ 0.96
SMAD5-207ENST00000511116 CNOT11Q9UKZ1 510 aaKnown RBP21.02■□□□□ 0.96
SMAD5-207ENST00000511116 FREM3P0C091 2139 aa21.02■□□□□ 0.96
SMAD5-207ENST00000511116 HSPB2A8KAH6 182 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 CXorf49A8MYA2 514 aaPredicted RBP21.01■□□□□ 0.95
SMAD5-207ENST00000511116 C1QAP02745 245 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 SSR2P43308 183 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 KIR2DL3P43628 341 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 PLIN5Q00G26 463 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 HSPB2Q16082 182 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 SPRED3Q2MJR0 410 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 DEPDC1Q5TB30 811 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 OR4C11Q6IEV9 310 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 MED27Q6P2C8 311 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 CYS1Q717R9 158 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 WDR53Q7Z5U6 358 aaPredicted RBP21.01■□□□□ 0.95
SMAD5-207ENST00000511116 OR4N5Q8IXE1 308 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 UBTD2Q8WUN7 234 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 TANKQ92844 425 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 CMTM7Q96FZ5 175 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 RBBP8Q99708 897 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 GPATCH1Q9BRR8 931 aaKnown RBP21.01■□□□□ 0.95
SMAD5-207ENST00000511116 CLEC4MQ9H2X3 399 aaPredicted RBP21.01■□□□□ 0.95
SMAD5-207ENST00000511116 RPF2Q9H7B2 306 aaKnown RBP21.01■□□□□ 0.95
SMAD5-207ENST00000511116 DLL4Q9NR61 685 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMAD5-207ENST00000511116 TSC22D4Q9Y3Q8 395 aa21.01■□□□□ 0.95
SMAD5-207ENST00000511116 ANKRD33BA6NCL7 494 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 CCNT2O60583 730 aaKnown RBP21■□□□□ 0.95
SMAD5-207ENST00000511116 TGFB1P01137 390 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 STMN1P16949 149 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 KLK2P20151 261 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 CEACAM8P31997 349 aaPredicted RBP21■□□□□ 0.95
SMAD5-207ENST00000511116 ARFIP1P53367 373 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 KCNJ2P63252 427 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 PRAMEF20Q5VT98 475 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 POMZP3Q6PJE2 187 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 ZBED8Q8IZ13 594 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 ST13P4Q8IZP2 240 aaPredicted RBP21■□□□□ 0.95
SMAD5-207ENST00000511116 ZCCHC7Q8N3Z6 543 aaKnown RBP21■□□□□ 0.95
SMAD5-207ENST00000511116 NAXEQ8NCW5 288 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 PPWD1Q96BP3 646 aaKnown RBP21■□□□□ 0.95
SMAD5-207ENST00000511116 RBM18Q96H35 190 aaKnown RBP21■□□□□ 0.95
SMAD5-207ENST00000511116 CPNE1Q99829 537 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 SLC6A15Q9H2J7 730 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 EXO5Q9H790 373 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 IKBKGQ9Y6K9 419 aa21■□□□□ 0.95
SMAD5-207ENST00000511116 DYRK3O43781 588 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 TRIM3O75382 744 aaPredicted RBP20.99■□□□□ 0.95
SMAD5-207ENST00000511116 ALOX15P16050 662 aaPredicted RBP20.99■□□□□ 0.95
SMAD5-207ENST00000511116 RPL21P46778 160 aaKnown RBP20.99■□□□□ 0.95
SMAD5-207ENST00000511116 TNFRSF17Q02223 184 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 SLAMF1Q13291 335 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 NTRK2Q16620 822 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 FLYWCH1Q4VC44 716 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 ZNF441Q8N8Z8 693 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 OR10G3Q8NGC4 313 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 FAM222BQ8WU58 562 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 MBD6Q96DN6 1003 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 ALPK1Q96QP1 1244 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 SORBS1Q9BX66 1292 aaKnown RBP20.99■□□□□ 0.95
SMAD5-207ENST00000511116 ZNF717Q9BY31 904 aaPredicted RBP20.99■□□□□ 0.95
SMAD5-207ENST00000511116 OR51B5Q9H339 312 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 ALKBH4Q9NXW9 302 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 ADGRE2Q9UHX3 823 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 PHF11Q9UIL8 331 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 MPDZO75970 2070 aa20.99■□□□□ 0.95
SMAD5-207ENST00000511116 FAM159BA6NKW6 160 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 A6NNC1 897 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 AHRRA9YTQ3 701 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 PLPP1O14494 284 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 ZSCAN12O43309 604 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 PROM1O43490 865 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 EPPINO95925 133 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 CLPSP04118 112 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 SERPINB3P29508 390 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 SSTR1P30872 391 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 GALNSP34059 522 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 PIK3CBP42338 1070 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 ASCL1P50553 236 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 HNRNPH2P55795 449 aaKnown RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 SLC37A1P57057 533 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 RAB10P61026 200 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 CRYZQ08257 329 aaKnown RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 SNTB1Q13884 538 aaKnown RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 DAZAP2Q15038 168 aaPredicted RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 EBPQ15125 230 aaKnown RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 ACSF3Q4G176 576 aaPredicted RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 MRM1Q6IN84 353 aaKnown RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 GRHL2Q6ISB3 625 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 ISCA2Q86U28 154 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 GPR180Q86V85 440 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 RNASE6Q93091 150 aaKnown RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 RMND5BQ96G75 393 aaPredicted RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 ATOH8Q96SQ7 321 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms