RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 GDF10P55107 478 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 RAB40BQ12829 278 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TMEM145Q8NBT3 493 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 EQTNQ9NQ60 294 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 GPRC5BQ9NZH0 403 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 GMPR2Q9P2T1 348 aaKnown RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 LRRC72A6NJI9 287 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 BCAS1O75363 584 aaPredicted RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 CD34P28906 385 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SLC6A9P48067 706 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 INCA1Q0VD86 236 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ITPK1Q13572 414 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 CLEC12AQ5QGZ9 265 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 NCBP2-AS2Q69YL0 99 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SLC2A7Q6PXP3 512 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SLC24A5Q71RS6 500 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 KCTD20Q7Z5Y7 419 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 LIX1LQ8IVB5 337 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 MCEMP1Q8IX19 187 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 GPC2Q8N158 579 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SFXN5Q8TD22 340 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 OR2AG1Q9H205 316 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ARL5CA6NH57 179 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 FGF4P08620 206 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 CRISP1P54107 249 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ARHGAP1Q07960 439 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SERPINA11Q86U17 422 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 OR5T1Q8NG75 326 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 OR10R2Q8NGX6 335 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TP63Q9H3D4 680 aaPredicted RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 ACSL6Q9UKU0 697 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 CEPT1Q9Y6K0 416 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ZNF536O15090 1300 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SLIT2O94813 1529 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TNFSF9P41273 254 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TAF10Q12962 218 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 FCRL1Q96LA6 429 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SEC22CQ9BRL7 303 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TMEM121BQ9BXQ6 578 aaPredicted RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 KCNJ16Q9NPI9 418 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 GRHPRQ9UBQ7 328 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SMIM28A0A1B0GU29 152 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SSX6Q7RTT6 188 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 CEACAM19Q7Z692 300 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 BARD1Q99728 777 aaKnown RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 SRMSQ9H3Y6 488 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ZCCHC3Q9NUD5 404 aaKnown RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 SCML1Q9UN30 329 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 BLACEA4D250 179 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 H3BMQ9 156 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 CD1EP15812 388 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 CLDN8P56748 225 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SERINC3Q13530 473 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 GPR50Q13585 617 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 COG8Q96MW5 612 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 AIG1Q9NVV5 245 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 NLE1Q9NVX2 485 aaPredicted RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 RBFOX1Q9NWB1 397 aaKnown RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 HYKKA2RU49 373 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 A8MXE2 369 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 F5H5P2 479 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 FHP07954 510 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 AKT2P31751 481 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 RHBDL3P58872 404 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 KIAA1324Q6UXG2 1013 aaKnown RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 IQCHQ86VS3 1027 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 UPF1Q92900 1129 aaKnown RBP eCLIP8.04□□□□□ -1.122e-8■■■■■ 38.1
HTT-208ENST00000510626 ABI3Q9P2A4 366 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 KLHL13Q9P2N7 655 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 MRPS23Q9Y3D9 190 aaKnown RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 TMEM131LA2VDJ0 1609 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 BCL9O00512 1426 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TCRBV3S1A0A5B6 114 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TMEM150CB9EJG8 249 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 BOLA2-SMG1P6H3BVE0 249 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 SLC16A8O95907 504 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 C6orf136Q5SQH8 315 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 PAQR3Q6TCH7 311 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 THOC6Q86W42 341 aaKnown RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 METTL4Q8N3J2 472 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 LHPPQ9H008 270 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 DNTTIP1Q9H147 329 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ZNF878C9JN71 531 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 J3QLW9 94 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 UGT2B7P16662 529 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ZNF19P17023 458 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 MFSD13AQ14CX5 517 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 PPP1R3AQ16821 1122 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 TFAP2BQ92481 460 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 OR51I1Q9H343 314 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 LUMP51884 338 aaPredicted RBP8.04□□□□□ -1.12
HTT-208ENST00000510626 PPIGQ13427 754 aaKnown RBP eCLIP8.04□□□□□ -1.126e-7■■□□□ 14
HTT-208ENST00000510626 PRAMEF14Q5SWL7 426 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 ZDHHC12Q96GR4 267 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 EBPLQ9BY08 206 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 HOXD1Q9GZZ0 328 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 EXTL2Q9UBQ6 330 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 RNF150Q9ULK6 438 aa8.04□□□□□ -1.12
HTT-208ENST00000510626 FBXO7Q9Y3I1 522 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms