RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 KRT6BP04259 564 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 KLK1P06870 262 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 PYGBP11216 843 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 ESRRAP11474 423 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-207ENST00000509102 ABOP16442 354 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 PIK3R1P27986 724 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 KRT6CP48668 564 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 MAPK12P53778 367 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 BNC2Q6ZN30 1099 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-207ENST00000509102 RTL4Q6ZR62 310 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 SLC29A4Q7RTT9 530 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 ZNF227Q86WZ6 799 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 SULF2Q8IWU5 870 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
UBE3D-207ENST00000509102 EID3Q8N140 333 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 PSD4Q8NDX1 1056 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 NUBPLQ8TB37 319 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 ZNF721Q8TF20 911 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 PPWD1Q96BP3 646 aaKnown RBP17.31■□□□□ 0.36
UBE3D-207ENST00000509102 CCDC126Q96EE4 140 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 TXLNGYQ9BZA5 131 aa17.31■□□□□ 0.36
UBE3D-207ENST00000509102 LIN28AQ9H9Z2 209 aaKnown RBP17.31■□□□□ 0.36
UBE3D-207ENST00000509102 ACOT7O00154 380 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 GLRA3O75311 464 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
UBE3D-207ENST00000509102 SBK3P0C264 359 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 SLC35E2P0CK97 266 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 KRT15P19012 456 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 TSPAN8P19075 237 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 IMPDH1P20839 514 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 HMOX2P30519 316 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 GALNSP34059 522 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 HSD17B3P37058 310 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 SOX3P41225 446 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 MPEG1Q2M385 716 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 SPRED3Q2MJR0 410 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 ZNF678Q5SXM1 525 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 LETMD1Q6P1Q0 360 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 RNF111Q6ZNA4 994 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 C16orf47Q6ZP98 133 aaPredicted RBP17.3■□□□□ 0.36
UBE3D-207ENST00000509102 GPRIN3Q6ZVF9 776 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 RPS27LQ71UM5 84 aaKnown RBP17.3■□□□□ 0.36
UBE3D-207ENST00000509102 MDGA2Q7Z553 956 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 SPPL2CQ8IUH8 684 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 TMEM151AQ8N4L1 468 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 ZNF321PQ8N8H1 164 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 SREK1Q8WXA9 508 aaKnown RBP17.3■□□□□ 0.36
UBE3D-207ENST00000509102 SGCZQ96LD1 299 aa17.3■□□□□ 0.36
UBE3D-207ENST00000509102 MRPL1Q9BYD6 325 aaKnown RBP17.3■□□□□ 0.36
UBE3D-207ENST00000509102 DIDO1Q9BTC0 2240 aaKnown RBP17.29■□□□□ 0.36
UBE3D-207ENST00000509102 TMEM200CA6NKL6 621 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 DLX3O60479 287 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 OR6B1O95007 311 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 OR4F21O95013 312 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 CLDN1O95832 211 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 PDYNP01213 254 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 HSD3B1P14060 373 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 HSD3B2P26439 372 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 DEKP35659 375 aaKnown RBP17.29■□□□□ 0.36
UBE3D-207ENST00000509102 GPR85P60893 370 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 NAA20P61599 178 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 ERVK-8P63133 956 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 PLGLB1Q02325 96 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 ZNF267Q14586 743 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-207ENST00000509102 NDUFAF5Q5TEU4 345 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 PAOXQ6QHF9 649 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 RPTNQ6XPR3 784 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 GK5Q6ZS86 529 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 SIAH3Q8IW03 269 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 METTL4Q8N3J2 472 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 CDYL2Q8N8U2 506 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 GOLM1Q8NBJ4 401 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 OR4K14Q8NGD5 310 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 ZNF382Q96SR6 550 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 L2HGDHQ9H9P8 463 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 PSME2Q9UL46 239 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 ERVK-19Q9WJR5 959 aa17.29■□□□□ 0.36
UBE3D-207ENST00000509102 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 OR6C76A6NM76 312 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 PRRG2O14669 202 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 ULK1O75385 1050 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 IGKV3-11P04433 115 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 P04436 131 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 TNFRSF8P28908 595 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 CCT5P48643 541 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 PRKAA2P54646 552 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 TBL3Q12788 808 aaKnown RBP17.28■□□□□ 0.36
UBE3D-207ENST00000509102 ASPHQ12797 758 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 CSTF3Q12996 717 aaKnown RBP17.28■□□□□ 0.36
UBE3D-207ENST00000509102 LCP2Q13094 533 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 RGS9BPQ6ZS82 235 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 COMMD6Q7Z4G1 85 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 GALNT12Q8IXK2 581 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 DND1Q8IYX4 353 aaKnown RBP17.28■□□□□ 0.36
UBE3D-207ENST00000509102 SLC15A4Q8N697 577 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 ZFP62Q8NB50 900 aaPredicted RBP17.28■□□□□ 0.36
UBE3D-207ENST00000509102 METTL6Q8TCB7 284 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 TMEM237Q96Q45 408 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 GAL3ST4Q96RP7 486 aa17.28■□□□□ 0.36
UBE3D-207ENST00000509102 FAIM2Q9BWQ8 316 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms