RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 PEX11GQ96HA9 241 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 IP6K3Q96PC2 410 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 DGAT2Q96PD7 388 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 CTRCQ99895 268 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 SYNPO2LQ9H987 977 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 HCN3Q9P1Z3 774 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 DHCR7Q9UBM7 475 aaKnown RBP13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 KCND3Q9UK17 655 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 ACSL6Q9UKU0 697 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 CES1P1Q9UKY3 287 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZNF451Q9Y4E5 1061 aa13.57□□□□□ -0.24
HMGCLL1-208ENST00000508459 A0A087WV62 115 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZNF860A6NHJ4 632 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 DUXAA6NLW8 204 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 C4orf51C9J302 202 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 PLOD2O00469 737 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 COQ9O75208 318 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 DNAJC8O75937 253 aaPredicted RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 DXOO77932 396 aaKnown RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 HEXBP07686 556 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 CCL4P13236 92 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 CPMP14384 443 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 HOXB6P17509 224 aaKnown RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 CAPN3P20807 821 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 IL12AP29459 219 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 NCBP2P52298 156 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 IGLV3-21P80748 117 aaPredicted RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 FADDQ13158 208 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 RSPO4Q2I0M5 234 aaPredicted RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 SPDYE7PQ495Y7 208 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 MFSD4BQ5TF39 518 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZCCHC12Q6PEW1 402 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZNF517Q6ZMY9 492 aaPredicted RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 SLC30A8Q8IWU4 369 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 POU5F2Q8N7G0 328 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 MR1Q95460 341 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 KIAA1143Q96AT1 154 aaPredicted RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 NXPE2Q96DL1 559 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 TEX37Q96LM6 180 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 AMDHD1Q96NU7 426 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 MUC13Q9H3R2 512 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 MRPS2Q9Y399 296 aaKnown RBP13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 GVINP1Q7Z2Y8 2422 aa13.56□□□□□ -0.24
HMGCLL1-208ENST00000508459 USP34Q70CQ2 3546 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 BRINP1O60477 761 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 TNFSF15O95150 251 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 NTRK1P04629 796 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZGLP1P0C6A0 271 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 CHI3L1P36222 383 aaPredicted RBP13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 STT3AP46977 705 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 DGKQP52824 942 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 MC1RQ01726 317 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 FOLH1Q04609 750 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 ELAVL1Q15717 326 aaKnown RBP13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 MINDY4Q4G0A6 757 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 C3orf38Q5JPI3 329 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 CPZQ66K79 652 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 C18orf63Q68DL7 685 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 BNC2Q6ZN30 1099 aaPredicted RBP13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZNF621Q6ZSS3 439 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 SCUBE1Q8IWY4 988 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 NLGN4XQ8N0W4 816 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 METTL25Q8N6Q8 603 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 NLGN4YQ8NFZ3 816 aaPredicted RBP13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 OR7G1Q8NGA0 311 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 OR14A16Q8NHC5 309 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 FAM122AQ96E09 287 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 PHOX2BQ99453 314 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 CGREF1Q99674 301 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 ADAP2Q9NPF8 381 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 SLC52A3Q9NQ40 469 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 SATB2Q9UPW6 733 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 B3GALT1Q9Y5Z6 326 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 CROCCQ5TZA2 2017 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 MYO15AQ9UKN7 3530 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 KNTC1P50748 2209 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 DNAH14Q0VDD8 3507 aa13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
HMGCLL1-208ENST00000508459 WDR87Q6ZQQ6 2873 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 VSTM2BA6NLU5 285 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 PGRMC2O15173 223 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 EMC8O43402 210 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 PLOD3O60568 738 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 DLGAP3O95886 979 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 ABCB1P08183 1280 aaPredicted RBP13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 OR1D4P47884 311 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZFP36L2P47974 494 aaKnown RBP13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 EEFSECP57772 596 aaKnown RBP13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 GABREP78334 506 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 OLR1P78380 273 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 NCF4Q15080 339 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 NSDHLQ15738 373 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 C1orf189Q5VU69 101 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 ZNF385CQ66K41 422 aaPredicted RBP13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 ERICH5Q6P6B1 374 aa13.54□□□□□ -0.24
HMGCLL1-208ENST00000508459 PRSS41Q7RTY9 318 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms