RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CAV1Q03135 178 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 NAB1Q13506 487 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 SETDB1Q15047 1291 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 TESK1Q15569 626 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 HYAL4Q2M3T9 481 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ZNF791Q3KP31 576 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 PRAMEF20Q5VT98 475 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ADGRD1Q6QNK2 874 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 LYPD8Q6UX82 237 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ZDHHC24Q6UX98 284 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 GPR180Q86V85 440 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 DMRTC2Q8IXT2 367 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 CENPLQ8N0S6 344 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ZCCHC7Q8N3Z6 543 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 C7orf57Q8NEG2 295 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 OR10Q1Q8NGQ4 319 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 SPACA9Q96E40 222 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 FBXL20Q96IG2 436 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ART5Q96L15 291 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 GAL3ST4Q96RP7 486 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 MTERF1Q99551 399 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 CENPKQ9BS16 269 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 TTYH2Q9BSA4 534 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ERVK-6Q9BXR3 956 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 RAB17Q9H0T7 212 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 LDAHQ9H6V9 325 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 EXO5Q9H790 373 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ACTR8Q9H981 624 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 MS4A12Q9NXJ0 267 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ERVK-19Q9WJR5 959 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ACOT9Q9Y305 439 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 UTP11Q9Y3A2 253 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 CSMD2Q7Z408 3487 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 MED13LQ71F56 2210 aa10.65□□□□□ -0.71
HMGCS1-204ENST00000507293 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 DCHS2Q6V1P9 2916 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 A0A087X1B8 175 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 TRGV5A0A0B4J1U4 118 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 LRRC14BA6NHZ5 514 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 TMPRSS11DO60235 418 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 SUSD5O60279 629 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 EEDO75530 441 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 GLI4P10075 376 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 NR2F6P10588 404 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 GFAPP14136 432 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 ENDOUP21128 410 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 TLX1P31314 330 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 BUD31P41223 144 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 RIPPLY3P57055 190 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 KCNJ2P63252 427 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 PHEXP78562 749 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF267Q14586 743 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC10A1Q14973 349 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 TRADDQ15628 312 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 PFKFB4Q16877 469 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 C1orf185Q5T7R7 199 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 WLSQ5T9L3 541 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 MROH9Q5TGP6 573 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 LIPJQ5W064 366 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC22A10Q63ZE4 541 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 RTL6Q6ICC9 239 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 B3GNT6Q6ZMB0 384 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 RNF111Q6ZNA4 994 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 ST13P4Q8IZP2 240 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 RHEBL1Q8TAI7 183 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 PAQR8Q8TEZ7 354 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 TANKQ92844 425 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 SARAFQ96BY9 339 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 MRRFQ96E11 262 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 RBM18Q96H35 190 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF559Q9BR84 538 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 PELOQ9BRX2 385 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF717Q9BY31 904 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF703Q9H7S9 590 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 SH2D2AQ9NP31 389 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 SNX15Q9NRS6 342 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.64□□□□□ -0.716e-6■□□□□ 8.2
HMGCS1-204ENST00000507293 SPRR3Q9UBC9 169 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 ACAD8Q9UKU7 415 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 TSC22D4Q9Y3Q8 395 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 PCDHGA11Q9Y5H2 935 aa10.64□□□□□ -0.71
HMGCS1-204ENST00000507293 A0A0A6YYD5 115 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 A0A0G2JNJ9 132 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 IQANK1A0A1B0GTG1 560 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 A0A1W2PR48 441 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 LRRC3CA6NJW4 275 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 GLOD5A6NK44 160 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 WASHC1A8K0Z3 465 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 H0YIV9 168 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 PROM1O43490 865 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 KLK8O60259 260 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 OR10H2O60403 315 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 HCN1O60741 890 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 WDR1O75083 606 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 LRATO95237 230 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 C2P06681 752 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 HOXD4P09016 255 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 RFPL3SP0C7P2 107 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 ADH7P40394 386 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms