RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ALOX15P16050 662 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 TNFRSF8P28908 595 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 ARFIP1P53367 373 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 TNFRSF17Q02223 184 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 ASPHQ12797 758 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 CUL3Q13618 768 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 MPEG1Q2M385 716 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZNF791Q3KP31 576 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 METTL2BQ6P1Q9 378 aaKnown RBP13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 KLC3Q6P597 504 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 RPS27LQ71UM5 84 aaKnown RBP13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 PHF10Q8WUB8 498 aaKnown RBP13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 DCAKDQ8WVC6 231 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZDHHC11Q9H8X9 412 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 SH2D2AQ9NP31 389 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 MTRF1LQ9UGC7 380 aaKnown RBP13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 PKDREJQ9NTG1 2253 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 POC1B-GALNT4F8VUJ3 575 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 TPOP07202 933 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 RBP1P09455 135 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 CCL3P10147 92 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 TLX1P31314 330 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 BIKQ13323 160 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZNF267Q14586 743 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 OPN5Q6U736 354 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 RTL4Q6ZR62 310 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 CD163Q86VB7 1156 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 ST13P4Q8IZP2 240 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 RPRMLQ8N4K4 120 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 TMEM251Q8N6I4 163 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 C7orf57Q8NEG2 295 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 NUBPLQ8TB37 319 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 SGCZQ96LD1 299 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 PAFAH2Q99487 392 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 NTMT1Q9BV86 223 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 TTTY12Q9BZ98 90 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 PROK2Q9HC23 129 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 PHF11Q9UIL8 331 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 PCTPQ9UKL6 214 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 PPT2Q9UMR5 302 aa13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 NCOA6Q14686 2063 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE2-209ENST00000506419 TRIM49D1C9J1S8 452 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 STX16-NPEPL1H3BU86 382 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 STX16O14662 325 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 AIFM1O95831 613 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 INHBAP08476 426 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 CELA3AP09093 270 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 COX7A2P14406 83 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 GCAP28676 217 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 PIGAP37287 484 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 DNASE1L1P49184 302 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 SERPINB9P50453 376 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 HERVK_113P63132 956 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 ERVK-8P63133 956 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 PLGLB1Q02325 96 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 TRAF3Q13114 568 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 GXYLT1Q4G148 440 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 GOLM1Q8NBJ4 401 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 ATP6V1E2Q96A05 226 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 REPS1Q96D71 796 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 FBXL20Q96IG2 436 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 FMO2Q99518 471 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 FAM173AQ9BQD7 235 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 CENPKQ9BS16 269 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 ERVK-6Q9BXR3 956 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 TRIM8Q9BZR9 551 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 IL1RL2Q9HB29 575 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 LYARQ9NX58 379 aaKnown RBP13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 XPR1Q9UBH6 696 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 COPS7AQ9UBW8 275 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZNF225Q9UK10 706 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 ERVK-19Q9WJR5 959 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 LIPGQ9Y5X9 500 aa13.29□□□□□ -0.28
CDC42SE2-209ENST00000506419 OTOGQ6ZRI0 2925 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 IGHG3P01860 377 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 KLK1P06870 262 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 SLC35E2P0CK97 266 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 COL6A2P12110 1019 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 COX6B1P14854 86 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 TSPAN8P19075 237 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 BUD31P41223 144 aaPredicted RBP13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 CCNG1P51959 295 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 CDH13P55290 713 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 SLC37A1P57057 533 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 HYAL4Q2M3T9 481 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 FRG2Q64ET8 278 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 ARHGAP11AQ6P4F7 1023 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 CYP20A1Q6UW02 462 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 RGS9BPQ6ZS82 235 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 TRILQ7L0X0 811 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 MILR1Q7Z6M3 343 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 ACBD4Q8NC06 268 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 OR4F6Q8NGB9 312 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms