RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SLC2A12Q8TD20 617 aa16.6■□□□□ 0.25
SMN1-204ENST00000506163 DAZLQ92904 295 aaKnown RBP16.6■□□□□ 0.25
SMN1-204ENST00000506163 SENP5Q96HI0 755 aaPredicted RBP16.6■□□□□ 0.25
SMN1-204ENST00000506163 DGAT2Q96PD7 388 aa16.6■□□□□ 0.25
SMN1-204ENST00000506163 BARD1Q99728 777 aaKnown RBP16.6■□□□□ 0.25
SMN1-204ENST00000506163 HES7Q9BYE0 225 aa16.6■□□□□ 0.25
SMN1-204ENST00000506163 SSU72Q9NP77 194 aaKnown RBP16.6■□□□□ 0.25
SMN1-204ENST00000506163 MYO18BQ8IUG5 2567 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 H3BQF6 201 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 WISP1O95388 367 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 IGKV3-11P04433 115 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 DHRS4L1P0CG22 281 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 SOX18P35713 384 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 SERPINB4P48594 390 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 TAS2R50P59544 299 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 DUSP2Q05923 314 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 SPINK14Q6IE38 97 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 OR52E8Q6IFG1 317 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 FAM180BQ6P0A1 224 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 GALNT18Q6P9A2 607 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 ST13P4Q8IZP2 240 aaPredicted RBP16.59■□□□□ 0.25
SMN1-204ENST00000506163 LGI4Q8N135 537 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 OR2T11Q8NH01 316 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 RBM18Q96H35 190 aaKnown RBP16.59■□□□□ 0.25
SMN1-204ENST00000506163 TAAR6Q96RI8 345 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 TRMOQ9BU70 441 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 EBPLQ9BY08 206 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMN1-204ENST00000506163 ZNF395Q9H8N7 513 aaPredicted RBP16.59■□□□□ 0.25
SMN1-204ENST00000506163 SIRT5Q9NXA8 310 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 MCM8Q9UJA3 840 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 SVILO95425 2214 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 CROCCQ5TZA2 2017 aa16.59■□□□□ 0.25
SMN1-204ENST00000506163 UBR5O95071 2799 aaPredicted RBP16.58■□□□□ 0.25
SMN1-204ENST00000506163 TRAV17A0A0B4J275 112 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 AZIN1O14977 448 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 PCDH7O60245 1069 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 ZNF354AO60765 605 aaPredicted RBP16.58■□□□□ 0.24
SMN1-204ENST00000506163 ERLIN1O75477 346 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 NEURL1O76050 574 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 CLPSP04118 112 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 SLC35E2P0CK97 266 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 SRSF11Q05519 484 aaKnown RBP16.58■□□□□ 0.24
SMN1-204ENST00000506163 ACSM2AQ08AH3 577 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 KANK2Q63ZY3 851 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 ACSM2BQ68CK6 577 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 SLC48A1Q6P1K1 146 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 Q6ZSR9 355 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 C16orf78Q8WTQ4 265 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 WDR41Q9HAD4 459 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 DLGAP4Q9Y2H0 992 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 FIS1Q9Y3D6 152 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 DNAJC15Q9Y5T4 150 aa16.58■□□□□ 0.24
SMN1-204ENST00000506163 WDR91A4D1P6 747 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 SYNDIG1LA6NDD5 238 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 PRAMEF2O60811 474 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 CRCPO75575 148 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 ZFAND5O76080 213 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 FGF4P08620 206 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 CT62P0C5K7 136 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 TIA1P31483 386 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMN1-204ENST00000506163 PTGER1P34995 402 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 UQCRFS1P47985 274 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 XKP51811 444 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 TRA2BP62995 288 aaKnown RBP16.57■□□□□ 0.24
SMN1-204ENST00000506163 PLIN5Q00G26 463 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 BIKQ13323 160 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 KIAA0040Q15053 153 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 OR1C1Q15619 314 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 PRSS53Q2L4Q9 553 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 SPIN4Q56A73 249 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 SPDYAQ5MJ70 313 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 RPUSD3Q6P087 351 aaKnown RBP16.57■□□□□ 0.24
SMN1-204ENST00000506163 OR4K14Q8NGD5 310 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 UTP23Q9BRU9 249 aaKnown RBP16.57■□□□□ 0.24
SMN1-204ENST00000506163 TRIM45Q9H8W5 580 aaPredicted RBP16.57■□□□□ 0.24
SMN1-204ENST00000506163 ZDHHC2Q9UIJ5 367 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 TRAF6Q9Y4K3 522 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 ACTL7BQ9Y614 415 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 COPG1Q9Y678 874 aaKnown RBP16.57■□□□□ 0.24
SMN1-204ENST00000506163 FLNCQ14315 2725 aa16.57■□□□□ 0.24
SMN1-204ENST00000506163 C1orf226A1L170 272 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 TCP11X1B4DZS4 312 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 ITM2AO43736 263 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 WISP2O76076 250 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 IL3P08700 152 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 LINC00032P0C843 101 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 CPMP14384 443 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 PIK3R1P27986 724 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 TRHRP34981 398 aaPredicted RBP16.56■□□□□ 0.24
SMN1-204ENST00000506163 ERVK-8P63133 956 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 RNF4P78317 190 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 ASPHQ12797 758 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 ZNF267Q14586 743 aaPredicted RBP16.56■□□□□ 0.24
SMN1-204ENST00000506163 CASP8Q14790 479 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 HSDL2Q6YN16 418 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 NUDCD3Q8IVD9 361 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 C9orf40Q8IXQ3 194 aa16.56■□□□□ 0.24
SMN1-204ENST00000506163 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMN1-204ENST00000506163 GRHL3Q8TE85 626 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms