RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ABHD17B	Q5VST6	288 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	CPSF7	Q8N684	471 aa	Known RBP	13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	OR2L5	Q8NG80	312 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	OR1N1	Q8NGS0	311 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	GRHL3	Q8TE85	626 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	CMTM5	Q96DZ9	223 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	PTCHD1	Q96NR3	888 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	NPL	Q9BXD5	320 aa	Predicted RBP	13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	REXO4	Q9GZR2	422 aa	Known RBP	13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	AKTIP	Q9H8T0	292 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	AGPAT4	Q9NRZ5	378 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	ARL8B	Q9NVJ2	186 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	STMN3	Q9NZ72	180 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	TAGLN3	Q9UI15	199 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	SNX6	Q9UNH7	406 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	RRP15	Q9Y3B9	282 aa	Known RBP	13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	RNF11	Q9Y3C5	154 aa		13.8	□□□□□ -0.2
CNBP-208	ENST00000504813	PTPN13	Q12923	2485 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	ZGRF1	Q86YA3	2104 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	HIVEP3	Q5T1R4	2406 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	ATP6AP2	A0A1C7CYW4	349 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	TCRBV16S1A1N1	A0A5B0	115 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813		A8MUI8	341 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	CAPN14	A8MX76	684 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	ANKRD65	E5RJM6	399 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	PSMD12	O00232	456 aa	Predicted RBP	13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	UGDH	O60701	494 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	ATP6AP2	O75787	350 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	F10	P00742	488 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	LBP	P18428	481 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	MAOA	P21397	527 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	SLC26A5	P58743	744 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	IRX1	P78414	480 aa	Predicted RBP	13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	ZNF33B	Q06732	778 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	ZRSR2	Q15696	482 aa	Known RBP	13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	GGTA1P	Q4G0N0	100 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	PAGE2B	Q5JRK9	111 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	FHL5	Q5TD97	284 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	LIPJ	Q5W064	366 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	1e-15	■■□□□ 12.1
CNBP-208	ENST00000504813	NPAS2	Q99743	824 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	TUBB1	Q9H4B7	451 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	ELOVL6	Q9H5J4	265 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	NECTIN3	Q9NQS3	549 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	PRDM9	Q9NQV7	894 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	TEKT2	Q9UIF3	430 aa		13.79	□□□□□ -0.2
CNBP-208	ENST00000504813	USP9X	Q93008	2570 aa	Predicted RBP	13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	TRAV17	A0A0B4J275	112 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	OR5H15	A6NDH6	313 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	SLC28A1	O00337	649 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	RGS14	O43566	566 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	SEMA7A	O75326	666 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	PRDX6	P30041	224 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	PLA2G16	P53816	162 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	NCALD	P61601	193 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	KLF10	Q13118	480 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	SQLE	Q14534	574 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	ATP6AP1L	Q52LC2	224 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	ACER2	Q5QJU3	275 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	TMEM198	Q66K66	360 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	FCRLB	Q6BAA4	426 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	HIST2H2AA3	Q6FI13	130 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	TRIM40	Q6P9F5	258 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	ABHD17C	Q6PCB6	329 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	SPATA19	Q7Z5L4	167 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	TREML1	Q86YW5	311 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	LAS2	Q8IYD9	372 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	L3MBTL4	Q8NA19	623 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	ELP5	Q8TE02	316 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	FAR1	Q8WVX9	515 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	KLHL29	Q96CT2	875 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	ZNF354B	Q96LW1	612 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	C3orf30	Q96M34	536 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	SERINC2	Q96SA4	455 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	MS4A8	Q9BY19	250 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	PRM3	Q9NNZ6	103 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	PRDM7	Q9NQW5	492 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813	CLDN16	Q9Y5I7	305 aa		13.78	□□□□□ -0.2
CNBP-208	ENST00000504813		A0A088AWK7	358 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	ANKUB1	A6NFN9	424 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	MANBA	O00462	879 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	B3GALT2	O43825	422 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	T-ENOL	P0DO92	83 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	ZNF10	P21506	573 aa	Predicted RBP	13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	HNRNPF	P52597	415 aa	Known RBP	13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	RAB38	P57729	211 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	RPS6KA2	Q15349	733 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	IMPG1	Q17R60	797 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	SPRED3	Q2MJR0	410 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	XKR7	Q5GH72	579 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	MED27	Q6P2C8	311 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	SCIMP	Q6UWF3	145 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	RNF165	Q6ZSG1	346 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	CHSY3	Q70JA7	882 aa		13.77	□□□□□ -0.21
CNBP-208	ENST00000504813	SCUBE1	Q8IWY4	988 aa		13.77	□□□□□ -0.21

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