RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 EBPLQ9BY08 206 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 GSDMCQ9BYG8 508 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 ELOVL4Q9GZR5 314 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OSBPL2Q9H1P3 480 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 RHOJQ9H4E5 214 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CCDC86Q9H6F5 360 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 C11orf49Q9H6J7 331 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TBC1D17Q9HA65 648 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 APOBEC3GQ9HC16 384 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 FBRSL1Q9HCM7 1045 aaKnown RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 CLN6Q9NWW5 311 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 TEX10Q9NXF1 929 aaPredicted RBP3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 OAZ3Q9UMX2 235 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 MAP4K5Q9Y4K4 846 aa3.52□□□□□ -1.85
PCDH11X-208ENST00000504220 NFASCO94856 1347 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TNRC18O15417 2968 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SPTAN1Q13813 2472 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A1B0GVM2 712 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A1W2PPE3 182 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 H7BY64 318 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 BCKDKO14874 412 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PIP5K1BO14986 540 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PER2O15055 1255 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PGRMC2O15173 223 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CD3EAPO15446 510 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SEPT4O43236 478 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 AIREO43918 545 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SCGNO76038 276 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OPN1SWP03999 348 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PRKCGP05129 697 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 S100A9P06702 114 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OR56A5P0C7T3 313 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PRR35P0CG20 571 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NR2F6P10588 404 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 THRBP10828 461 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 AKR1A1P14550 325 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 IGFBP5P24593 272 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 GDI1P31150 447 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MAP2K4P45985 399 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 HTR5AP47898 357 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PRKAA2P54646 552 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 EPHA5P54756 1037 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CCL23P55773 120 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SRSF11Q05519 484 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 COTL1Q14019 142 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DOC2BQ14184 412 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF267Q14586 743 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PUM1Q14671 1186 aaKnown RBP eCLIP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SIX1Q15475 284 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TSC22D1Q15714 1073 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 FSCN1Q16658 493 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MSS51Q4VC12 460 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC38Q5VT99 294 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF385CQ66K41 422 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PAPD4Q6PIY7 484 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SMARCD3Q6STE5 483 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 C17orf99Q6UX52 265 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 RASSF6Q6ZTQ3 369 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ASB18Q6ZVZ8 466 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CREB3L2Q70SY1 520 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 THAP5Q7Z6K1 395 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TCTE3Q8IZS6 198 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DAW1Q8N136 415 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF567Q8N184 647 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 METTL4Q8N3J2 472 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ANKRD52Q8NB46 1076 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OR11H4Q8NGC9 324 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 RNASE11Q8TAA1 199 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC15Q8TF66 581 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SFT2D1Q8WV19 159 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TWIST2Q8WVJ9 160 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM74Q96NL1 305 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ALKBH3Q96Q83 286 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TBX5Q99593 518 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 AARSD1Q9BTE6 412 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CNPPD1Q9BV87 410 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NLNQ9BYT8 704 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC6A15Q9H2J7 730 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SMPD3Q9NY59 655 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ADAM30Q9UKF2 790 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SSR3Q9UNL2 185 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NAALAD2Q9Y3Q0 740 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PUS1Q9Y606 427 aaKnown RBP eCLIP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CABIN1Q9Y6J0 2220 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 POM121BA6NF01 834 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DUXAA6NLW8 204 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OR2AG2A6NM03 316 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CLDN25C9JDP6 229 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SAP18O00422 153 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 GNB5O14775 395 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SUV39H1O43463 412 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 HTRA2O43464 458 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 HCRTO43612 131 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SCN2BO60939 215 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 STX11O75558 287 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 GSRP00390 522 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CATP04040 527 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SMIM6P0DI80 62 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 EPXP11678 715 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SMPD1P17405 629 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms