RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 HRKO00198 91 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CES2O00748 559 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 TXNDC9O14530 226 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 GPRIN2O60269 458 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 LDB3O75112 727 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NDUFS7O75251 213 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SH3BGRLO75368 114 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 PRKRAO75569 313 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 ZFAND5O76080 213 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 VAPBO95292 243 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MATN4O95460 622 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 GAS8O95995 478 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 IFNA2P01563 188 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 TP53P04637 393 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 APRTP07741 180 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CYC1P08574 325 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ZSCAN5DPP0CG00 497 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 RNH1P13489 461 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 GABRA1P14867 456 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 PTNP21246 168 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CNR1P21554 472 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CTSSP25774 331 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MGAT1P26572 445 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 ACVR1BP36896 505 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SLC1A1P43005 524 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 TTPAP49638 278 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ADARP55265 1226 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 UBASH3AP57075 661 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 BTN3A2P78410 334 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ABATP80404 500 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MPP1Q00013 466 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SORDQ00796 357 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ACVR1Q04771 509 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 RGS1Q08116 209 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 FAM27E3Q08E93 113 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CDH17Q12864 832 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 FAPQ12884 760 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SLC13A2Q13183 592 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NAE1Q13564 534 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SNX1Q13596 522 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CAPRIN1Q14444 709 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 SLC10A1Q14973 349 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NR1I3Q14994 352 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 HERC3Q15034 1050 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NNATQ16517 81 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ACKR1Q16570 336 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 PHKG1Q16816 387 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CLEC12BQ2HXU8 276 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ASTE1Q2TB18 679 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 P3H1Q32P28 736 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CHRFAM7AQ494W8 412 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 EIPR1Q53HC9 387 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 AARS2Q5JTZ9 985 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 NDUFAF5Q5TEU4 345 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ZNF470Q6ECI4 717 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 VWA1Q6PCB0 445 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NXPE4Q6UWF7 544 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 HSDL2Q6YN16 418 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 UBE2R2Q712K3 238 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 YRDCQ86U90 279 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 C17orf64Q86WR6 236 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 KIF18BQ86Y91 864 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 LACC1Q8IV20 430 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 DENND6AQ8IWF6 608 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SCUBE1Q8IWY4 988 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 RHOT2Q8IXI1 618 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 C9orf40Q8IXQ3 194 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 KLHDC8BQ8IXV7 354 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 LRRC75A-AS1Q8N1F1 130 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MPP5Q8N3R9 675 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 AFAP1L2Q8N4X5 818 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ARIH2OSQ8N7S6 290 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 PRELID2Q8N945 189 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 CNEP1R1Q8N9A8 125 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ANKRD53Q8N9V6 530 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MFSD9Q8NBP5 474 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NEIL3Q8TAT5 605 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SLC2A12Q8TD20 617 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 UTP15Q8TED0 518 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 ATL1Q8WXF7 558 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ALG3Q92685 438 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 HTRA1Q92743 480 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NEUROG1Q92886 237 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 INTS12Q96CB8 462 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 MFSD3Q96ES6 412 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 PLPPR2Q96GM1 343 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ZNF597Q96LX8 424 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 WFIKKN1Q96NZ8 548 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 BIRC8Q96P09 236 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NDNQ99608 321 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 GPR21Q99679 349 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 EBNA1BP2Q99848 306 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 TUBA1CQ9BQE3 449 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 ANP32EQ9BTT0 268 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 DOHHQ9BU89 302 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MED18Q9BUE0 208 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SARGQ9BW04 601 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SGPP1Q9BX95 441 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms