RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 ADAM19Q9H013 955 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 LIN28AQ9H9Z2 209 aaKnown RBP10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 PLAC1Q9HBJ0 212 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 PNPLA3Q9NST1 481 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 DEPPQ9NTK1 212 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 MS4A12Q9NXJ0 267 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 CD274Q9NZQ7 290 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 ADGRE2Q9UHX3 823 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 PSAT1Q9Y617 370 aa10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 SETD2Q9BYW2 2564 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-211ENST00000502404 SPG11Q96JI7 2443 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 INTS1Q8N201 2190 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 MED13LQ71F56 2210 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 TRGV5A0A0B4J1U4 118 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 TMEM200CA6NKL6 621 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 GNB5O14775 395 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 KLK8O60259 260 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 PRKNO60260 465 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 CCDC166P0CW27 439 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 STMN1P16949 149 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 PAFAH1B1P43034 410 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 HSPA7P48741 367 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 HNRNPFP52597 415 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 ART1P52961 327 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 FOLH1Q04609 750 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 TFF3Q07654 80 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 DOC2AQ14183 400 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 ZNF460Q14592 562 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 SF3B4Q15427 424 aaKnown RBP eCLIP10.29□□□□□ -0.767e-7■■■■■ 28.1
UBE2D3-211ENST00000502404 TBCCQ15814 346 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 SLC25A35Q3KQZ1 300 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 PIGGQ5H8A4 983 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 EMC4Q5J8M3 183 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 C16orf47Q6ZP98 133 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 TMEM251Q8N6I4 163 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 TMEM52Q8NDY8 209 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 CHDHQ8NE62 594 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 NUBPLQ8TB37 319 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 SLC2A12Q8TD20 617 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 PYROXD1Q8WU10 500 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 TANKQ92844 425 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 SCYL1Q96KG9 808 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 DGAT2Q96PD7 388 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 PELOQ9BRX2 385 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 LIN7BQ9HAP6 207 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 PRDM7Q9NQW5 492 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 ALKBH4Q9NXW9 302 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 B4GALT7Q9UBV7 327 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 ZNF490Q9ULM2 529 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 RNF112Q9ULX5 631 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 BOKQ9UMX3 212 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 PCDHGB3Q9Y5G1 929 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 CLDN16Q9Y5I7 305 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 CELSR1Q9NYQ6 3014 aa10.29□□□□□ -0.76
UBE2D3-211ENST00000502404 IQANK1A0A1B0GTG1 560 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 ATP6AP2A0A1C7CYW4 349 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 PINLYPA6NC86 204 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 EFCAB8A8MWE9 144 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 G3V3Y1 287 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CCDC188H7C350 402 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CCNT2O60583 730 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 ATP6AP2O75787 350 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 SEC31AO94979 1220 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 GLI4P10075 376 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 HIST1H1TP22492 207 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CPN2P22792 545 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 ATP5A1P25705 553 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CASP2P42575 452 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 MSH2P43246 934 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 SSR2P43308 183 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 MAGEA5P43359 124 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 KCNJ2P63252 427 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CHIT1Q13231 466 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 C18orf21Q32NC0 220 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 C1orf185Q5T7R7 199 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 MED27Q6P2C8 311 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 LRRC70Q7Z2Q7 622 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 ZBED8Q8IZ13 594 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 LIX1Q8N485 282 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 ACOT4Q8N9L9 421 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 STAG3L4Q8TBR4 150 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 NINJ1Q92982 152 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CMTM7Q96FZ5 175 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 SENP5Q96HI0 755 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CAPZA3Q96KX2 299 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 PWWP2AQ96N64 755 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CSF3RQ99062 836 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CPNE1Q99829 537 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 QPCTLQ9NXS2 382 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 CNIH4Q9P003 139 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 RNF14Q9UBS8 474 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 PHF11Q9UIL8 331 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 PTBP2Q9UKA9 531 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 MTORP42345 2549 aa10.28□□□□□ -0.76
UBE2D3-211ENST00000502404 DNAJC13O75165 2243 aa10.27□□□□□ -0.76
UBE2D3-211ENST00000502404 FAM221AA4D161 298 aa10.27□□□□□ -0.77
UBE2D3-211ENST00000502404 HSPB2A8KAH6 182 aa10.27□□□□□ -0.77
UBE2D3-211ENST00000502404 CAPN14A8MX76 684 aa10.27□□□□□ -0.77
UBE2D3-211ENST00000502404 E7ESA3 106 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms