RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 IGKV3-11P04433 115 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 KRT15P19012 456 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 SOX3P41225 446 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 OR52E8Q6IFG1 317 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 MYO7BQ6PIF6 2116 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 SH2D5Q6ZV89 423 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 GPRIN3Q6ZVF9 776 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 COMMD6Q7Z4G1 85 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 MDGA2Q7Z553 956 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 FJX1Q86VR8 437 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 TDRPQ86YL5 185 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 SIAH3Q8IW03 269 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 DOK4Q8TEW6 326 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 L3HYPDHQ96EM0 354 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 SENP5Q96HI0 755 aaPredicted RBP17.07■□□□□ 0.32
HOXD11-202ENST00000498438 GPR137Q96N19 417 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 RASL10BQ96S79 203 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 PELOQ9BRX2 385 aaKnown RBP17.07■□□□□ 0.32
HOXD11-202ENST00000498438 BRF2Q9HAW0 419 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 HPF1Q9NWY4 346 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 ERVK-11Q9UQG0 969 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 CROCCQ5TZA2 2017 aa17.07■□□□□ 0.32
HOXD11-202ENST00000498438 ARHGAP10A1A4S6 786 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 NPIPA5E9PKD4 350 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 MANBAO00462 879 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 PGRMC2O15173 223 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 OR10H2O60403 315 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 OR6B1O95007 311 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 MLYCDO95822 493 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 ZNF24P17028 368 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 MEOX1P50221 254 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 GALNT1Q10472 559 aaPredicted RBP17.06■□□□□ 0.32
HOXD11-202ENST00000498438 LCP2Q13094 533 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 RNFT1Q5M7Z0 435 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 CCNYL2Q5T2Q4 361 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 SULF2Q8IWU5 870 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 C9orf40Q8IXQ3 194 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 GPALPP1Q8IXQ4 340 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 OR5L2Q8NGL0 311 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 FBXL20Q96IG2 436 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 ART5Q96L15 291 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 CNPPD1Q9BV87 410 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 TIMMDC1Q9NPL8 285 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 NPIPA1Q9UND3 350 aa17.06■□□□□ 0.32
HOXD11-202ENST00000498438 A0A1B0GUH1 482 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 A0A1W2PS29 197 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 G3V2L1 256 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 PEX1O43933 1283 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 KRT6AP02538 564 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 PROCP04070 461 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 KRT6BP04259 564 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 MYL2P10916 166 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 KRT6CP48668 564 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 MAPK12P53778 367 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 PER3P56645 1201 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 GPR85P60893 370 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 VSNL1P62760 191 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 ERVK-8P63133 956 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 RBPJQ06330 500 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 TBL3Q12788 808 aaKnown RBP17.05■□□□□ 0.32
HOXD11-202ENST00000498438 SPRED3Q2MJR0 410 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 NDUFAF5Q5TEU4 345 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 HIST2H2BCQ6DN03 193 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 IL20RBQ6UXL0 311 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 ZYG11AQ6WRX3 759 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 PSD4Q8NDX1 1056 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 GSTO2Q9H4Y5 243 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 ERVK-19Q9WJR5 959 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 STK38LQ9Y2H1 464 aa17.05■□□□□ 0.32
HOXD11-202ENST00000498438 TRGV8A0A0C4DH27 118 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 KLRC4-KLRK1H3BQV0 150 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 ZNF354AO60765 605 aaPredicted RBP17.04■□□□□ 0.32
HOXD11-202ENST00000498438 CDH16O75309 829 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 CLDN1O95832 211 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 SLC35E2P0CK97 266 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 PIK3R1P27986 724 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 HMOX2P30519 316 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 RFC3P40938 356 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 HTR6P50406 440 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 ASPHQ12797 758 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 ZNF267Q14586 743 aaPredicted RBP17.04■□□□□ 0.32
HOXD11-202ENST00000498438 KRTCAP3Q53RY4 240 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 C1orf52Q8N6N3 182 aaKnown RBP17.04■□□□□ 0.32
HOXD11-202ENST00000498438 CCNYL1Q8N7R7 359 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 POGLUT1Q8NBL1 392 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 NUBPLQ8TB37 319 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 METTL6Q8TCB7 284 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 RIT1Q92963 219 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 RELTQ969Z4 430 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 CCDC126Q96EE4 140 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 MAGED4Q96JG8 741 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 NMRK1Q9NWW6 199 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 SH3BGRL2Q9UJC5 107 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 EML6Q6ZMW3 1958 aa17.04■□□□□ 0.32
HOXD11-202ENST00000498438 TFECO14948 347 aaPredicted RBP17.03■□□□□ 0.32
HOXD11-202ENST00000498438 ASNA1O43681 348 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 PLIN3O60664 434 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 SLC19A2O60779 497 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 ZG16O60844 167 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 ENO1P06733 434 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms