RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 MDFICQ9P1T7 246 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ZNF624Q9P2J8 865 aaPredicted RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 CHORDC1Q9UHD1 332 aaPredicted RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 XPO7Q9UIA9 1087 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 VPS28Q9UK41 221 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ANGPTL2Q9UKU9 493 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 GRID1Q9ULK0 1009 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 AGTPBP1Q9UPW5 1226 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 B3GALT5Q9Y2C3 310 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 L3MBTL1Q9Y468 752 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 RIPK3Q9Y572 518 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ASB3Q9Y575 518 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 CITO14578 2027 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MED19A0JLT2 244 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 MAGEB16A2A368 324 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 SLC15A5A6NIM6 579 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 H0YJX3 145 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 COPEO14579 308 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 CASQ2O14958 399 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 NVLO15381 856 aaKnown RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 GYG2O15488 501 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 PRPSAP2O60256 369 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 GLRA3O75311 464 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 IFNB1P01574 187 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 APOA4P06727 396 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 BPGMP07738 259 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 KRT19P08727 400 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 IGHV4-38-2P0DP08 117 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 VPREB1P12018 145 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 IL4RP24394 825 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 CRABP2P29373 138 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 SDC4P31431 198 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 HSPA1LP34931 641 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 SERPINB5P36952 375 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 ELK3P41970 407 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 SLC15A1P46059 708 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 HCAR3P49019 387 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 PNLIPRP2P54317 469 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 RPS18P62269 152 aaKnown RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 CREB5Q02930 508 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 AP1B1Q10567 949 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 NR1D2Q14995 579 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 FASTKD3Q14CZ7 662 aaKnown RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 E2F5Q15329 346 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 TRIP13Q15645 432 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 DCAF4L1Q3SXM0 396 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 KBTBD12Q3ZCT8 623 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 TAF1BQ53T94 588 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 CELF3Q5SZQ8 465 aaKnown RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 ANKRD22Q5VYY1 191 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 TMEM198Q66K66 360 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 SPOPLQ6IQ16 392 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 MZT2BQ6NZ67 158 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 LRRC8BQ6P9F7 803 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 FAM47EQ6ZV65 393 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 SETD3Q86TU7 594 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 CRLF3Q8IUI8 442 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 C4orf33Q8N1A6 199 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 CRYBG2Q8N1P7 616 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 WDSUB1Q8N9V3 476 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 L3MBTL4Q8NA19 623 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 KCTD6Q8NC69 237 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 PAPD5Q8NDF8 572 aaKnown RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 CCDC110Q8TBZ0 833 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 RDH11Q8TC12 318 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 MGARPQ8TDB4 240 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 CDKL2Q92772 493 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 NT5C3BQ969T7 300 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 TMEM143Q96AN5 459 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 MTERF3Q96E29 417 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 CNDP1Q96KN2 507 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 PPP1R2P1Q96PQ5 205 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 QKIQ96PU8 341 aaKnown RBP eCLIP4.4□□□□□ -1.71
SSR3-209ENST00000498205 BTBD9Q96Q07 612 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 VAT1Q99536 393 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 ZNF184Q99676 751 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 BARHL1Q9BZE3 327 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 SEMA6AQ9H2E6 1030 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 HHATLQ9HCP6 504 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 CHMP1AQ9HD42 196 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.4□□□□□ -1.71
SSR3-209ENST00000498205 NDE1Q9NXR1 346 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 NSMCE4AQ9NXX6 385 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 TAS2R1Q9NYW7 299 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 TBK1Q9UHD2 729 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 DCDC2Q9UHG0 476 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 BCAP29Q9UHQ4 241 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 TTLL3Q9Y4R7 772 aa4.4□□□□□ -1.71
SSR3-209ENST00000498205 COL4A4P53420 1690 aaPredicted RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 DICER1Q9UPY3 1922 aaKnown RBP4.4□□□□□ -1.71
SSR3-209ENST00000498205 GOLGA8QA0A0J9YX86 632 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 A0A1W2PPM1 405 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 A0A1W2PR77 199 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 GOLGA8OA6NCC3 632 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 ASB14A6NK59 587 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 SDR42E2A6NKP2 422 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 PRR32B1ATL7 298 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 TMEM114B3SHH9 223 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 GOLGA8NF8WBI6 632 aa4.39□□□□□ -1.71
SSR3-209ENST00000498205 SLCO1B7G3V0H7 640 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms