RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 RTL6Q6ICC9 239 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 TMEM211Q6ICI0 200 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 LYPD8Q6UX82 237 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 CCDC91Q7Z6B0 441 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 LAS2Q8IYD9 372 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 OR2W6PQ8NHA6 318 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 EPS8L3Q8TE67 593 aaKnown RBP17.14■□□□□ 0.33
PRKCB-209ENST00000498058 CHTF18Q8WVB6 975 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 ZIM3Q96PE6 472 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 KCNC2Q96PR1 638 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 ATOH8Q96SQ7 321 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 TBCDQ9BTW9 1192 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 OR51B5Q9H339 312 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 IGSF5Q9NSI5 407 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 TUBA8Q9NY65 449 aaPredicted RBP17.14■□□□□ 0.33
PRKCB-209ENST00000498058 RNF112Q9ULX5 631 aa17.14■□□□□ 0.33
PRKCB-209ENST00000498058 SPG11Q96JI7 2443 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 NINQ8N4C6 2090 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 WASHC1A8K0Z3 465 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 UBXN8O00124 270 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 PRKRAO75569 313 aaKnown RBP17.13■□□□□ 0.33
PRKCB-209ENST00000498058 NADKO95544 446 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-209ENST00000498058 IGHG3P01860 377 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 FREM3P0C091 2139 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 PCNAP12004 261 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 HIST1H1TP22492 207 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-209ENST00000498058 GCAP28676 217 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 CRABP2P29373 138 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 CHRNB4P30926 498 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 SLCO1A2P46721 670 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 LAPTM5Q13571 262 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 CEP85LQ5SZL2 805 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 MROH9Q5TGP6 573 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 RTL4Q6ZR62 310 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 LRRC70Q7Z2Q7 622 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 CDH24Q86UP0 819 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 C9orf40Q8IXQ3 194 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 OR7G3Q8NG95 312 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 OR8K3Q8NH51 312 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 ASB5Q8WWX0 329 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 RND1Q92730 232 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 PPWD1Q96BP3 646 aaKnown RBP17.13■□□□□ 0.33
PRKCB-209ENST00000498058 STMN4Q9H169 189 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-209ENST00000498058 ATG4BQ9Y4P1 393 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 FAM215AQ9Y5M1 114 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 C2CD3Q4AC94 2353 aa17.13■□□□□ 0.33
PRKCB-209ENST00000498058 A0A1B0GVC2 190 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 TRIM49D1C9J1S8 452 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 IGKV3-11P04433 115 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 MYZAPP0CAP1 466 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 MTHFD2P13995 350 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 KRT15P19012 456 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 CAPN3P20807 821 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 CPN2P22792 545 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 MSX1P28360 303 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 HPDP32754 393 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-209ENST00000498058 PIGAP37287 484 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 TGM3Q08188 693 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 ZNF844Q08AG5 666 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 ASPHQ12797 758 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 SERTAD2Q14140 314 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 PAGE2BQ5JRK9 111 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 C18orf63Q68DL7 685 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 TRILQ7L0X0 811 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 UCN3Q969E3 161 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 SENP5Q96HI0 755 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-209ENST00000498058 SMC6Q96SB8 1091 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 FAM173AQ9BQD7 235 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 IL1RL2Q9HB29 575 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 PROK2Q9HC23 129 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 SH2D2AQ9NP31 389 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 TBK1Q9UHD2 729 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 LGALS13Q9UHV8 139 aa17.12■□□□□ 0.33
PRKCB-209ENST00000498058 LRRC14BA6NHZ5 514 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 ACOT7O00154 380 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 RGS16O15492 202 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 ENDOUP21128 410 aaKnown RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 TYK2P29597 1187 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 STT3AP46977 705 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 HNRNPH2P55795 449 aaKnown RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 PCDH1Q08174 1060 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 SLAMF1Q13291 335 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 RCN2Q14257 317 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 HIST2H2ACQ16777 129 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 HYAL4Q2M3T9 481 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 ZNF791Q3KP31 576 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 PIGGQ5H8A4 983 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 DEPDC1Q5TB30 811 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 KHDRBS2Q5VWX1 349 aaKnown RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 HIST2H2AA3Q6FI13 130 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 MED27Q6P2C8 311 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 RAPH1Q70E73 1250 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 SLC22A16Q86VW1 577 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 LIX1LQ8IVB5 337 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 DMRTC2Q8IXT2 367 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 FAM109AQ8N4B1 249 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 GOLGA6L1Q8N7Z2 621 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 GOLM1Q8NBJ4 401 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 SRFBP1Q8NEF9 429 aaKnown RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 OR5M3Q8NGP4 307 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms