RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ATP6V1HQ9UI12 483 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 PSME2Q9UL46 239 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 CAPN7Q9Y6W3 813 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 FREM2Q5SZK8 3169 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 IGF2RP11717 2491 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 CPAMD8Q8IZJ3 1885 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 IGKV3D-11A0A0A0MRZ8 115 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 TCRBV16S1A1N1A0A5B0 115 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 CCDC22O60826 627 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 CTNSO60931 367 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 DCTN3O75935 186 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 GPR75O95800 540 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 RECKO95980 971 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 CYC1P08574 325 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 CPMP14384 443 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 IL12AP29459 219 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 KIR3DL1P43629 444 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 NCBP2P52298 156 aaKnown RBP eCLIP12.72□□□□□ -0.37
CPNE1-227ENST00000498056 KCNK10P57789 538 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 C21orf58P58505 322 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 IRX1P78414 480 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-227ENST00000498056 HSPB3Q12988 150 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 SERTAD2Q14140 314 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 DPY19L1Q2PZI1 675 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 OR4F3Q6IEY1 312 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 ANKRD37Q7Z713 158 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 MTDHQ86UE4 582 aaKnown RBP12.72□□□□□ -0.37
CPNE1-227ENST00000498056 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 ANKS4BQ8N8V4 417 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-227ENST00000498056 ZFP28Q8NHY6 868 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 TESCQ96BS2 214 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 C8orf44Q96CB5 159 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 ZNF764Q96H86 408 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-227ENST00000498056 MESP1Q9BRJ9 268 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 DUSP26Q9BV47 211 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 ALOXE3Q9BYJ1 711 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 SAR1AQ9NR31 198 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 PNO1Q9NRX1 252 aaKnown RBP12.72□□□□□ -0.37
CPNE1-227ENST00000498056 DKK4Q9UBT3 224 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 PCDHGA6Q9Y5G7 932 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 HS3ST3B1Q9Y662 390 aa12.72□□□□□ -0.37
CPNE1-227ENST00000498056 ASPMQ8IZT6 3477 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 FRYQ5TBA9 3013 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 IGHV3-20A0A0C4DH32 117 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 CDC14CA4D256 554 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 GABRR3A8MPY1 467 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 A8MUA0 341 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 CREG1O75629 220 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 IGHEP01854 428 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 PRKAR1AP10644 381 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 LAMP1P11279 417 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 PCSK2P16519 638 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 CSNK2A2P19784 350 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 NT5EP21589 574 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 S100A3P33764 101 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 STT3AP46977 705 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 MRPL19P49406 292 aaKnown RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 XKP51811 444 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 POLR2JP52435 117 aaKnown RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 DGKQP52824 942 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 OR4D2P58180 307 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 DUSP2Q05923 314 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 LTB4RQ15722 352 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 PRSS53Q2L4Q9 553 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 SFT2D3Q587I9 215 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 ATP1A1-AS1Q5TC04 95 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 MED25Q71SY5 747 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 ANKRD46Q86W74 232 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 SAMD14Q8IZD0 417 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 PLPP5Q8NEB5 264 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 ERP27Q96DN0 273 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 ZBED6CLQ96FA7 236 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 PELOQ9BRX2 385 aaKnown RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 BHLHE41Q9C0J9 482 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-227ENST00000498056 ADAP2Q9NPF8 381 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 SLAMF7Q9NQ25 335 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 MRGBPQ9NV56 204 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 CES1P1Q9UKY3 287 aa12.71□□□□□ -0.37
CPNE1-227ENST00000498056 FAM234BA2RU67 622 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 SYNDIG1LA6NDD5 238 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 CCDC154A6NI56 674 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 CFLARO15519 480 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 RRP8O43159 456 aaKnown RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 TBX19O60806 448 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 SEC24DO94855 1032 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 ABCB1P08183 1280 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 PORP16435 677 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 TNNI3P19429 210 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 MMP11P24347 488 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 GPC1P35052 558 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 SOAT1P35610 550 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 PGDP52209 483 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 IGLV3-21P80748 117 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 SRSF11Q05519 484 aaKnown RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 KLF10Q13118 480 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 RCAN2Q14206 197 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 MPEG1Q2M385 716 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms