RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SYDE1Q6ZW31 735 aaPredicted RBP15.07■□□□□ 0
VIM-208ENST00000497849 ZNF572Q7Z3I7 529 aaPredicted RBP15.07■□□□□ 0
VIM-208ENST00000497849 CAND1Q86VP6 1230 aaKnown RBP15.07■□□□□ 0
VIM-208ENST00000497849 C9orf40Q8IXQ3 194 aa15.07■□□□□ 0
VIM-208ENST00000497849 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.07■□□□□ 0
VIM-208ENST00000497849 KLHDC8AQ8IYD2 350 aa15.07■□□□□ 0
VIM-208ENST00000497849 MNS1Q8NEH6 495 aa15.07■□□□□ 0
VIM-208ENST00000497849 GRK7Q8WTQ7 553 aa15.07■□□□□ 0
VIM-208ENST00000497849 WDYHV1Q96HA8 205 aa15.07■□□□□ 0
VIM-208ENST00000497849 GSX2Q9BZM3 304 aa15.07■□□□□ 0
VIM-208ENST00000497849 CALHM2Q9HA72 323 aa15.07■□□□□ 0
VIM-208ENST00000497849 UBTD1Q9HAC8 227 aa15.07■□□□□ 0
VIM-208ENST00000497849 CNIH4Q9P003 139 aa15.07■□□□□ 0
VIM-208ENST00000497849 FBXO5Q9UKT4 447 aa15.07■□□□□ 0
VIM-208ENST00000497849 SLC6A5Q9Y345 797 aa15.07■□□□□ 0
VIM-208ENST00000497849 ABCA1O95477 2261 aa15.06■□□□□ 0
VIM-208ENST00000497849 RAD51CO43502 376 aa15.06■□□□□ 0
VIM-208ENST00000497849 LDB3O75112 727 aa15.06■□□□□ 0
VIM-208ENST00000497849 TRIM3O75382 744 aaPredicted RBP15.06■□□□□ 0
VIM-208ENST00000497849 ERN1O75460 977 aaKnown RBP15.06■□□□□ 0
VIM-208ENST00000497849 SLU7O95391 586 aaKnown RBP15.06■□□□□ 0
VIM-208ENST00000497849 ACSL3O95573 720 aa15.06■□□□□ 0
VIM-208ENST00000497849 GUCA1CO95843 209 aa15.06■□□□□ 0
VIM-208ENST00000497849 HPNP05981 417 aa15.06■□□□□ 0
VIM-208ENST00000497849 CERS1P27544 350 aa15.06■□□□□ 0
VIM-208ENST00000497849 SOX18P35713 384 aa15.06■□□□□ 0
VIM-208ENST00000497849 PTH2RP49190 550 aa15.06■□□□□ 0
VIM-208ENST00000497849 CAPRIN1Q14444 709 aaKnown RBP15.06■□□□□ 0
VIM-208ENST00000497849 NHSL2Q5HYW2 709 aa15.06■□□□□ 0
VIM-208ENST00000497849 ANKRD22Q5VYY1 191 aa15.06■□□□□ 0
VIM-208ENST00000497849 PODNL1Q6PEZ8 512 aa15.06■□□□□ 0
VIM-208ENST00000497849 C4orf22Q6V702 233 aa15.06■□□□□ 0
VIM-208ENST00000497849 THOC6Q86W42 341 aaKnown RBP15.06■□□□□ 0
VIM-208ENST00000497849 FAM13CQ8NE31 585 aa15.06■□□□□ 0
VIM-208ENST00000497849 SLC22A8Q8TCC7 542 aa15.06■□□□□ 0
VIM-208ENST00000497849 RUNDC3BQ96NL0 473 aa15.06■□□□□ 0
VIM-208ENST00000497849 DOHHQ9BU89 302 aa15.06■□□□□ 0
VIM-208ENST00000497849 UGT2B28Q9BY64 529 aa15.06■□□□□ 0
VIM-208ENST00000497849 TRIM31Q9BZY9 425 aa15.06■□□□□ 0
VIM-208ENST00000497849 UBQLN3Q9H347 655 aa15.06■□□□□ 0
VIM-208ENST00000497849 DYRK1BQ9Y463 629 aa15.06■□□□□ 0
VIM-208ENST00000497849 ANK2Q01484 3957 aa15.05■□□□□ 0
VIM-208ENST00000497849 CTIFO43310 598 aaKnown RBP15.05■□□□□ -0
VIM-208ENST00000497849 TRAPPC6AO75865 159 aa15.05■□□□□ -0
VIM-208ENST00000497849 IGKV3-11P04433 115 aa15.05■□□□□ -0
VIM-208ENST00000497849 FBXO45P0C2W1 286 aa15.05■□□□□ -0
VIM-208ENST00000497849 CPA2P48052 419 aa15.05■□□□□ -0
VIM-208ENST00000497849 CDK9P50750 372 aaKnown RBP15.05■□□□□ -0
VIM-208ENST00000497849 PLA2G16P53816 162 aa15.05■□□□□ -0
VIM-208ENST00000497849 CDKN2DP55273 166 aa15.05■□□□□ -0
VIM-208ENST00000497849 ID2Q02363 134 aa15.05■□□□□ -0
VIM-208ENST00000497849 LMNTD2Q8IXW0 634 aa15.05■□□□□ -0
VIM-208ENST00000497849 SLC15A4Q8N697 577 aa15.05■□□□□ -0
VIM-208ENST00000497849 NOA1Q8NC60 698 aaKnown RBP15.05■□□□□ -0
VIM-208ENST00000497849 ATL1Q8WXF7 558 aa15.05■□□□□ -0
VIM-208ENST00000497849 TMEM158Q8WZ71 300 aa15.05■□□□□ -0
VIM-208ENST00000497849 NTNG2Q96CW9 530 aa15.05■□□□□ -0
VIM-208ENST00000497849 SERINC2Q96SA4 455 aa15.05■□□□□ -0
VIM-208ENST00000497849 SECISBP2Q96T21 854 aaKnown RBP15.05■□□□□ -0
VIM-208ENST00000497849 COPS7AQ9UBW8 275 aa15.05■□□□□ -0
VIM-208ENST00000497849 NDRG3Q9UGV2 375 aa15.05■□□□□ -0
VIM-208ENST00000497849 ASIC3Q9UHC3 531 aa15.05■□□□□ -0
VIM-208ENST00000497849 IKZF3Q9UKT9 509 aa15.05■□□□□ -0
VIM-208ENST00000497849 SLC22A14Q9Y267 594 aa15.05■□□□□ -0
VIM-208ENST00000497849 IKBKGQ9Y6K9 419 aa15.05■□□□□ -0
VIM-208ENST00000497849 HRKO00198 91 aa15.04■□□□□ -0
VIM-208ENST00000497849 CTAGE8P0CG41 777 aa15.04■□□□□ -0
VIM-208ENST00000497849 PGGT1BP53609 377 aa15.04■□□□□ -0
VIM-208ENST00000497849 SLC7A5Q01650 507 aa15.04■□□□□ -0
VIM-208ENST00000497849 SERTAD2Q14140 314 aa15.04■□□□□ -0
VIM-208ENST00000497849 EFTUD2Q15029 972 aaKnown RBP eCLIP15.04■□□□□ -0
VIM-208ENST00000497849 ADPRMQ3LIE5 342 aa15.04■□□□□ -0
VIM-208ENST00000497849 RBM20Q5T481 1227 aaKnown RBP15.04■□□□□ -0
VIM-208ENST00000497849 FNDC7Q5VTL7 733 aa15.04■□□□□ -0
VIM-208ENST00000497849 CTAGE4Q8IX94 777 aa15.04■□□□□ -0
VIM-208ENST00000497849 OR2L5Q8NG80 312 aa15.04■□□□□ -0
VIM-208ENST00000497849 SLC44A1Q8WWI5 657 aa15.04■□□□□ -0
VIM-208ENST00000497849 IGFBPL1Q8WX77 278 aa15.04■□□□□ -0
VIM-208ENST00000497849 CCT6BQ92526 530 aa15.04■□□□□ -0
VIM-208ENST00000497849 ANKRD9Q96BM1 317 aaPredicted RBP15.04■□□□□ -0
VIM-208ENST00000497849 PIK3IP1Q96FE7 263 aa15.04■□□□□ -0
VIM-208ENST00000497849 SENP5Q96HI0 755 aaPredicted RBP15.04■□□□□ -0
VIM-208ENST00000497849 ZNF597Q96LX8 424 aa15.04■□□□□ -0
VIM-208ENST00000497849 LRRC1Q9BTT6 524 aa15.04■□□□□ -0
VIM-208ENST00000497849 SFXN3Q9BWM7 321 aa15.04■□□□□ -0
VIM-208ENST00000497849 C20orf96Q9NUD7 363 aaPredicted RBP15.04■□□□□ -0
VIM-208ENST00000497849 TAS2R13Q9NYV9 303 aa15.04■□□□□ -0
VIM-208ENST00000497849 SNX24Q9Y343 169 aa15.04■□□□□ -0
VIM-208ENST00000497849 MAD1L1Q9Y6D9 718 aa15.04■□□□□ -0
VIM-208ENST00000497849 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.03■□□□□ -0
VIM-208ENST00000497849 A0A088AWK7 358 aa15.03■□□□□ -0
VIM-208ENST00000497849 MAGEB16A2A368 324 aa15.03■□□□□ -0
VIM-208ENST00000497849 A8MXE2 369 aa15.03■□□□□ -0
VIM-208ENST00000497849 F12P00748 615 aaPredicted RBP15.03■□□□□ -0
VIM-208ENST00000497849 ZNF10P21506 573 aaPredicted RBP15.03■□□□□ -0
VIM-208ENST00000497849 IVDP26440 423 aa15.03■□□□□ -0
VIM-208ENST00000497849 GABRB3P28472 473 aa15.03■□□□□ -0
VIM-208ENST00000497849 MTTPP55157 894 aa15.03■□□□□ -0
VIM-208ENST00000497849 TRADDQ15628 312 aa15.03■□□□□ -0
VIM-208ENST00000497849 EIPR1Q53HC9 387 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms