RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 RECQL5O94762 991 aaPredicted RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 FYNP06241 537 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 CYBAP13498 195 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 AKR1B1P15121 316 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 ERCC2P18074 760 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 CCND3P30281 292 aaPredicted RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 MECOMQ03112 1051 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 KRTAP13-3Q3SY46 172 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 REG3GQ6UW15 175 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 PIGWQ7Z7B1 504 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 PRUNE1Q86TP1 453 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 CCDC185Q8N715 623 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 RTL3Q8N8U3 475 aaKnown RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 KCTD6Q8NC69 237 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 P2RX5Q93086 422 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 RBM41Q96IZ5 413 aaKnown RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 LURAP1Q96LR2 239 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 SLF1Q9BQI6 1058 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 CCDC28BQ9BUN5 200 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 PAPOLGQ9BWT3 736 aaKnown RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 API5Q9BZZ5 524 aaKnown RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 RAI14Q9P0K7 980 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 LAMA3Q16787 3333 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 MYH7P12883 1935 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 GBF1Q92538 1859 aa4.07□□□□□ -1.76
MDM2-220ENST00000496959 COL11A1P12107 1806 aaPredicted RBP4.07□□□□□ -1.76
MDM2-220ENST00000496959 CROCCQ5TZA2 2017 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 INPP4BO15327 924 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 ZNF354AO60765 605 aaPredicted RBP4.06□□□□□ -1.76
MDM2-220ENST00000496959 SLC25A27O95847 323 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 IL11P20809 199 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 ABCE1P61221 599 aaKnown RBP4.06□□□□□ -1.76
MDM2-220ENST00000496959 SIX1Q15475 284 aaPredicted RBP4.06□□□□□ -1.76
MDM2-220ENST00000496959 MLF2Q15773 248 aaPredicted RBP4.06□□□□□ -1.76
MDM2-220ENST00000496959 CCDC158Q5M9N0 1113 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 SPANXN4Q5MJ08 99 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 RNLSQ5VYX0 342 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 NRARPQ7Z6K4 114 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 CAMKVQ8NCB2 501 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 LRRCC1Q9C099 1032 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 STRADBQ9C0K7 418 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 FZD8Q9H461 694 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 MOB1AQ9H8S9 216 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 IL1RAPQ9NPH3 570 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 HOXC10Q9NYD6 342 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 ZNF581Q9P0T4 197 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 PILRAQ9UKJ1 303 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 VSIG4Q9Y279 399 aa4.06□□□□□ -1.76
MDM2-220ENST00000496959 MYO5AQ9Y4I1 1855 aaKnown RBP4.06□□□□□ -1.76
MDM2-220ENST00000496959 ELP1O95163 1332 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 ADRB2P07550 413 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 PSMA3P25788 255 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 RGS7P49802 495 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 ACY1Q03154 408 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 COG2Q14746 738 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 SHHQ15465 462 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 CCL14Q16627 93 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 FAM174BQ3ZCQ3 159 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 C9orf66Q5T8R8 295 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 MFSD4BQ5TF39 518 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 DHRS11Q6UWP2 260 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 AGAP11Q8TF27 550 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 GRK7Q8WTQ7 553 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 BADQ92934 168 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 CNOT6LQ96LI5 555 aaKnown RBP4.05□□□□□ -1.76
MDM2-220ENST00000496959 RMDN2Q96LZ7 410 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 PORCNQ9H237 461 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 CELA1Q9UNI1 258 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 COL6A3P12111 3177 aa4.05□□□□□ -1.76
MDM2-220ENST00000496959 MCM3APO60318 1980 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 MYH4Q9Y623 1939 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 TMEM150CB9EJG8 249 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 ZNF749O43361 778 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 KIF5CO60282 957 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 GGPS1O95749 300 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 TIMP1P01033 207 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 IL10RBQ08334 325 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 KCTD2Q14681 263 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 OLFML2AQ68BL7 652 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 TATDN1Q6P1N9 297 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 TMEM179Q6ZVK1 233 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 KLHL30-AS1Q8NEE0 82 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 GLT1D1Q96MS3 346 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 TAAR6Q96RI8 345 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 SLC25A23Q9BV35 468 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 RPAP3Q9H6T3 665 aaPredicted RBP4.04□□□□□ -1.76
MDM2-220ENST00000496959 RPF1Q9H9Y2 349 aaKnown RBP4.04□□□□□ -1.76
MDM2-220ENST00000496959 C3orf14Q9HBI5 128 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 PHPT1Q9NRX4 125 aaPredicted RBP4.04□□□□□ -1.76
MDM2-220ENST00000496959 AATFQ9NY61 560 aaKnown RBP eCLIP4.04□□□□□ -1.76
MDM2-220ENST00000496959 HMG20BQ9P0W2 317 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 B4GALT7Q9UBV7 327 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 SWAP70Q9UH65 585 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 TANC1Q9C0D5 1861 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 LRRC37A2A6NM11 1700 aa4.04□□□□□ -1.76
MDM2-220ENST00000496959 TRAV18A0A075B6X5 111 aa4.03□□□□□ -1.76
MDM2-220ENST00000496959 TRGV8A0A0C4DH27 118 aa4.03□□□□□ -1.76
MDM2-220ENST00000496959 A0A0U1RQG5 324 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms