RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 SAMD14Q8IZD0 417 aaPredicted RBP18.27■□□□□ 0.52
ATG3-208ENST00000495756 KIAA1143Q96AT1 154 aaPredicted RBP18.27■□□□□ 0.52
ATG3-208ENST00000495756 DUSP26Q9BV47 211 aa18.27■□□□□ 0.52
ATG3-208ENST00000495756 CCDC106Q9BWC9 280 aa18.27■□□□□ 0.52
ATG3-208ENST00000495756 BHLHE41Q9C0J9 482 aaPredicted RBP18.27■□□□□ 0.52
ATG3-208ENST00000495756 GIMAP4Q9NUV9 329 aa18.27■□□□□ 0.52
ATG3-208ENST00000495756 KCND3Q9UK17 655 aa18.27■□□□□ 0.52
ATG3-208ENST00000495756 PCDHGA6Q9Y5G7 932 aa18.27■□□□□ 0.52
ATG3-208ENST00000495756 ALOX12BO75342 701 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 IL6P05231 212 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 PGRP06401 933 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 C8orf89P0DMQ9 161 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 CSNK2A2P19784 350 aaPredicted RBP18.26■□□□□ 0.51
ATG3-208ENST00000495756 S100A3P33764 101 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 FEN1P39748 380 aaKnown RBP18.26■□□□□ 0.51
ATG3-208ENST00000495756 CLN3Q13286 438 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 CEBPEQ15744 281 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 OR4F3Q6IEY1 312 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 GK5Q6ZS86 529 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 CIDECQ96AQ7 238 aaPredicted RBP18.26■□□□□ 0.51
ATG3-208ENST00000495756 BBS4Q96RK4 519 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 ALOXE3Q9BYJ1 711 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 GPN2Q9H9Y4 310 aaPredicted RBP18.26■□□□□ 0.51
ATG3-208ENST00000495756 DKK4Q9UBT3 224 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 ENTPD4Q9Y227 616 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 MYOCOSA0A1B0GUC4 107 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 TCRBV16S1A1N1A0A5B0 115 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 MYO1GB0I1T2 1018 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 NR5A2O00482 541 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 PDPK1O15530 556 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 CPMP14384 443 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 WNT3P56703 355 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 KCNK10P57789 538 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 PHC1P78364 1004 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 BIKQ13323 160 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 SERTAD2Q14140 314 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 TIGD2Q4W5G0 525 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 FAAH2Q6GMR7 532 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 FITM2Q8N6M3 262 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 NATD1Q8N6N6 113 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 C7orf57Q8NEG2 295 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 METTL21AQ8WXB1 218 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 GATA6Q92908 595 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 ERP27Q96DN0 273 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 SLAMF7Q9NQ25 335 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 SEMA3GQ9NS98 782 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 IL17BQ9UHF5 180 aa18.26■□□□□ 0.51
ATG3-208ENST00000495756 APC2O95996 2303 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 MED19A0JLT2 244 aaPredicted RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 TLX3O43711 291 aaPredicted RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 SLC35E2P0CK97 266 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 LIFP15018 202 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 PORP16435 677 aaPredicted RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 NTSP30990 170 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 FRKP42685 505 aaPredicted RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 DUSP2Q05923 314 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 CPZQ66K79 652 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 TMEM205Q6UW68 189 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 LANCL3Q6ZV70 420 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 TREML1Q86YW5 311 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 LRRC25Q8N386 305 aaPredicted RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 SNIP1Q8TAD8 396 aaKnown RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 VPS33AQ96AX1 596 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 SPDL1Q96EA4 605 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 ZBED6CLQ96FA7 236 aaPredicted RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 OR52E6Q96RD3 313 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 CCDC86Q9H6F5 360 aaKnown RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 SLC52A3Q9NQ40 469 aa18.25■□□□□ 0.51
ATG3-208ENST00000495756 FAM120CQ9NX05 1096 aaKnown RBP18.25■□□□□ 0.51
ATG3-208ENST00000495756 ZFHX4Q86UP3 3567 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 SYNDIG1LA6NDD5 238 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 CCDC154A6NI56 674 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 CAPN14A8MX76 684 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 SCN2BO60939 215 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 IGHEP01854 428 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 SNRPB2P08579 225 aaKnown RBP18.24■□□□□ 0.51
ATG3-208ENST00000495756 CAPN3P20807 821 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 EFNA1P20827 205 aaPredicted RBP18.24■□□□□ 0.51
ATG3-208ENST00000495756 MPIP34949 423 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 STT3AP46977 705 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 VPS26BQ4G0F5 336 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 ANXA8L1Q5VT79 327 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 ERMP1Q7Z2K6 904 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 VASH2Q86V25 355 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 CCDC116Q8IYX3 515 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 ST13P4Q8IZP2 240 aaPredicted RBP18.24■□□□□ 0.51
ATG3-208ENST00000495756 ZNF248Q8NDW4 579 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 SUN3Q8TAQ9 357 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 TSPEARQ8WU66 669 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 RBM18Q96H35 190 aaKnown RBP18.24■□□□□ 0.51
ATG3-208ENST00000495756 AMDHD1Q96NU7 426 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 ACSS1Q9NUB1 689 aaPredicted RBP18.24■□□□□ 0.51
ATG3-208ENST00000495756 WDR70Q9NW82 654 aa18.24■□□□□ 0.51
ATG3-208ENST00000495756 MRPS18BQ9Y676 258 aaKnown RBP18.24■□□□□ 0.51
ATG3-208ENST00000495756 CHD8Q9HCK8 2581 aa18.23■□□□□ 0.51
ATG3-208ENST00000495756 IGF2RP11717 2491 aa18.23■□□□□ 0.51
ATG3-208ENST00000495756 PRSS51A0A1B0GVH4 220 aa18.23■□□□□ 0.51
ATG3-208ENST00000495756 DYTNA2CJ06 578 aa18.23■□□□□ 0.51
ATG3-208ENST00000495756 RNASET2O00584 256 aaKnown RBP18.23■□□□□ 0.51
ATG3-208ENST00000495756 CFLARO15519 480 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms