RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PRSS53Q2L4Q9 553 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 LACTB2Q53H82 288 aaPredicted RBP18.14■□□□□ 0.49
HDAC4-212ENST00000495497 COLEC12Q5KU26 742 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 C6orf136Q5SQH8 315 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 FCRLBQ6BAA4 426 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 FAM71E1Q6IPT2 247 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 LINC00696Q6ZRV3 163 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 ASB18Q6ZVZ8 466 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 HOMEZQ8IX15 550 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 TMEM132CQ8N3T6 1108 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 CLHC1Q8NHS4 586 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.14■□□□□ 0.49
HDAC4-212ENST00000495497 ELP5Q8TE02 316 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 GFM2Q969S9 779 aaKnown RBP18.14■□□□□ 0.49
HDAC4-212ENST00000495497 NCLNQ969V3 563 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 TUBGCP3Q96CW5 907 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 RBM18Q96H35 190 aaKnown RBP18.14■□□□□ 0.49
HDAC4-212ENST00000495497 PPP3R2Q96LZ3 170 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 SMAD5Q99717 465 aaKnown RBP18.14■□□□□ 0.49
HDAC4-212ENST00000495497 C1orf50Q9BV19 199 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 KCNK13Q9HB14 408 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 CLCA3PQ9Y6N3 262 aa18.14■□□□□ 0.49
HDAC4-212ENST00000495497 HRKO00198 91 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 OR10H2O60403 315 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 SDC1P18827 310 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 FEN1P39748 380 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 ST13P50502 369 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 GPR143P51810 404 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 HEPACAMQ14CZ8 416 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 ATP6AP1LQ52LC2 224 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 VWA5B1Q5TIE3 1220 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 AGAP7PQ5VUJ5 663 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 PTRH1Q86Y79 214 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 ST13P4Q8IZP2 240 aaPredicted RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 APCDD1LQ8NCL9 501 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 LSM14AQ8ND56 463 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 B3GNT7Q8NFL0 401 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 OR14A16Q8NHC5 309 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 LRRC8CQ8TDW0 803 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 EXOSC8Q96B26 276 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 KLHL29Q96CT2 875 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 METTL2AQ96IZ6 378 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 AGAP4Q96P64 663 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 TSSK3Q96PN8 268 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 CCT7Q99832 543 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 AKTIPQ9H8T0 292 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 MYNNQ9NPC7 610 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 ZNF223Q9UK11 482 aaPredicted RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 UTS2RQ9UKP6 389 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 G3BP2Q9UN86 482 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 EXO1Q9UQ84 846 aaKnown RBP18.13■□□□□ 0.49
HDAC4-212ENST00000495497 ZFYVE26Q68DK2 2539 aa18.13■□□□□ 0.49
HDAC4-212ENST00000495497 SMG1Q96Q15 3661 aaKnown RBP18.12■□□□□ 0.49
HDAC4-212ENST00000495497 MAN1A2O60476 641 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 LRATO95237 230 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 DDAH2O95865 285 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 SLC35E2P0CK97 266 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 SFTPCP11686 197 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 BCKDHAP12694 445 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 DRD2P14416 443 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 PLIN5Q00G26 463 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 TERF2Q15554 542 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 JMJD6Q6NYC1 403 aaPredicted RBP18.12■□□□□ 0.49
HDAC4-212ENST00000495497 WDR75Q8IWA0 830 aaKnown RBP18.12■□□□□ 0.49
HDAC4-212ENST00000495497 FNDC5Q8NAU1 212 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 SLC2A12Q8TD20 617 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 CKAP2Q8WWK9 683 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 DAZLQ92904 295 aaKnown RBP18.12■□□□□ 0.49
HDAC4-212ENST00000495497 NPAS2Q99743 824 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 OR8D2Q9GZM6 311 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 SLCO1B3Q9NPD5 702 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 TMED5Q9Y3A6 229 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 ZNF451Q9Y4E5 1061 aa18.12■□□□□ 0.49
HDAC4-212ENST00000495497 IGSF10Q6WRI0 2623 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 TRBV11-1A0A0K0K1C0 115 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 SYNDIG1LA6NDD5 238 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 ATP8B1O43520 1251 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 AKAP10O43572 662 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 PRKNO60260 465 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-212ENST00000495497 CT62P0C5K7 136 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 CPMP14384 443 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 COX7A2P14406 83 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 PORP16435 677 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-212ENST00000495497 DDCP20711 480 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 SOX11P35716 441 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 GSTM5P46439 218 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 CD97P48960 835 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 BIKQ13323 160 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 ZNF267Q14586 743 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-212ENST00000495497 HSP90B2PQ58FF3 399 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 IL23RQ5VWK5 629 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 ANKRD26P1Q6NSI1 321 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 TICAM1Q8IUC6 712 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 CRLF3Q8IUI8 442 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 LIX1Q8N485 282 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 MORN4Q8NDC4 146 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 THAP3Q8WTV1 239 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-212ENST00000495497 RIT1Q92963 219 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 CNRIP1Q96F85 164 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-212ENST00000495497 MFRPQ9BY79 579 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms