RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CEP128Q6ZU80 1094 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 CHSY3Q70JA7 882 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 GPALPP1Q8IXQ4 340 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ZCCHC7Q8N3Z6 543 aaKnown RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 TMEM251Q8N6I4 163 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 PTGR2Q8N8N7 351 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 SRFBP1Q8NEF9 429 aaKnown RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 OR8K3Q8NH51 312 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 UBE2E3Q969T4 207 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ISL2Q96A47 359 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 C16orf45Q96MC5 204 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 CDC42EP4Q9H3Q1 356 aaKnown RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 RPF2Q9H7B2 306 aaKnown RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ACTR8Q9H981 624 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ZBTB26Q9HCK0 441 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 SH2D2AQ9NP31 389 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 CHST11Q9NPF2 352 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 PNPLA3Q9NST1 481 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 TEX10Q9NXF1 929 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 TUBA8Q9NY65 449 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 TSC22D4Q9Y3Q8 395 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ASB4Q9Y574 426 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 DOCK7Q96N67 2140 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 NKX2-6A6NCS4 301 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 SYCE1LA8MT33 242 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 H0YIV9 168 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 PROM1O43490 865 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ACSL3O95573 720 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 SBK3P0C264 359 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 POU3F2P20265 443 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ENDOUP21128 410 aaKnown RBP10.75□□□□□ -0.69
VTI1A-208ENST00000494728 SERPINB1P30740 379 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 PIGAP37287 484 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 HERVK_113P63132 956 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ERVK-8P63133 956 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 PLGLB1Q02325 96 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 TFF3Q07654 80 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 TRAF3Q13114 568 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ACAP2Q15057 778 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 FAM83EQ2M2I3 478 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ZNF791Q3KP31 576 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-208ENST00000494728 RTL6Q6ICC9 239 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ARHGAP11AQ6P4F7 1023 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 RTL4Q6ZR62 310 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 GPR180Q86V85 440 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 CCDC71Q8IV32 467 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-208ENST00000494728 OR5M9Q8NGP3 310 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 RGMAQ96B86 450 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 SENP5Q96HI0 755 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-208ENST00000494728 FBXL20Q96IG2 436 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 DGAT2Q96PD7 388 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 TREX2Q9BQ50 279 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-208ENST00000494728 CNPPD1Q9BV87 410 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ERVK-6Q9BXR3 956 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 FUT8Q9BYC5 575 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ENKD1Q9H0I2 346 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 VPS11Q9H270 941 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 IPPKQ9H8X2 491 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 PROK2Q9HC23 129 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 XPR1Q9UBH6 696 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 COPS7AQ9UBW8 275 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ERVK-19Q9WJR5 959 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 RNF6Q9Y252 685 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 ANGPTL3Q9Y5C1 460 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 FAM215AQ9Y5M1 114 aa10.75□□□□□ -0.69
VTI1A-208ENST00000494728 FLNAP21333 2647 aaKnown RBP10.74□□□□□ -0.69
VTI1A-208ENST00000494728 SYNDIG1LA6NDD5 238 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 LRRC3CA6NJW4 275 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 FAM90A27PA6NNH2 459 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 NPIPA2E9PIF3 369 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 NPIPA3F8WFD2 350 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PPP6CO00743 305 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 IGHG3P01860 377 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 CT62P0C5K7 136 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 RFPL3SP0C7P2 107 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 NR2F6P10588 404 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 ALOX15P16050 662 aaPredicted RBP10.74□□□□□ -0.69
VTI1A-208ENST00000494728 IGFBP2P18065 325 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 TYK2P29597 1187 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 SLC37A1P57057 533 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 NUP107P57740 925 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PLIN5Q00G26 463 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 EBPQ15125 230 aaKnown RBP10.74□□□□□ -0.69
VTI1A-208ENST00000494728 SPRED3Q2MJR0 410 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PIGGQ5H8A4 983 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PRAMEF20Q5VT98 475 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 LIPJQ5W064 366 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 TMEM64Q6YI46 380 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 FAM47EQ6ZV65 393 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 TRILQ7L0X0 811 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 MMP21Q8N119 569 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 L3MBTL4Q8NA19 623 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 GOLM1Q8NBJ4 401 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 UHMK1Q8TAS1 419 aaKnown RBP10.74□□□□□ -0.69
VTI1A-208ENST00000494728 NUBPLQ8TB37 319 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 SLC44A1Q8WWI5 657 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 PHF21BQ96EK2 531 aa10.74□□□□□ -0.69
VTI1A-208ENST00000494728 GAL3ST4Q96RP7 486 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms