RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 IGHG3P01860 377 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 FCGR3AP08637 254 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 CYP3A5P20815 502 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 LYZP61626 148 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 MSLNQ13421 630 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-216ENST00000493758 ANKRD55Q3KP44 614 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 FHL5Q5TD97 284 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 Q6ZRG5 221 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 ASPGQ86U10 573 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 C11orf42Q8N5U0 333 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 ICA1LQ8NDH6 482 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 CHDHQ8NE62 594 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-216ENST00000493758 OR4F5Q8NH21 305 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 GTSF1Q8WW33 167 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 PRCCQ92733 491 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-216ENST00000493758 ESAMQ96AP7 390 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 PCED1BQ96HM7 432 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF414Q96IQ9 312 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 AGPAT1Q99943 283 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 TSPYL1Q9H0U9 437 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 ABCB8Q9NUT2 735 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 TECRQ9NZ01 308 aaKnown RBP3.12□□□□□ -1.91
ITGB1-216ENST00000493758 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 B4GALT7Q9UBV7 327 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 ATG4BQ9Y4P1 393 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 CROCCQ5TZA2 2017 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 TRAV9-2A0A087WT02 112 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 A4D1N5 150 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 TSPAN2O60636 221 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 EPOP01588 193 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 SNRPCP09234 159 aaKnown RBP3.11□□□□□ -1.91
ITGB1-216ENST00000493758 BRCC3P46736 316 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 ADARP55265 1226 aaKnown RBP3.11□□□□□ -1.91
ITGB1-216ENST00000493758 HEPACAMQ14CZ8 416 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 KCTD11Q693B1 232 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 CGB2Q6NT52 195 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 ABRAXAS1Q6UWZ7 409 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 WDR49Q8IV35 697 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 ARL14Q8N4G2 192 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 AP2M1Q96CW1 435 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 RBM18Q96H35 190 aaKnown RBP3.11□□□□□ -1.91
ITGB1-216ENST00000493758 EPSTI1Q96J88 318 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 SERAC1Q96JX3 654 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 SIGLEC12Q96PQ1 595 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 PAXXQ9BUH6 204 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 Q9HAA7 133 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 MAGEF1Q9HAY2 307 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 CNIH4Q9P003 139 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 ARMCX1Q9P291 453 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 ABCD2Q9UBJ2 740 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 PSORS1C1Q9UIG5 152 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 EXOC6BQ9Y2D4 811 aa3.11□□□□□ -1.91
ITGB1-216ENST00000493758 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 A0A1W2PNU3 283 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 ZSCAN5CA6NGD5 496 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 SRPX2O60687 465 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 DUSP11O75319 330 aaKnown RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 ANXA9O76027 345 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 STBD1O95210 358 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 CPNE6O95741 557 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 GLULP15104 373 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 ALDH3B1P43353 468 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 EMC2Q15006 297 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 LTB4RQ15722 352 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 C14orf28Q4W4Y0 310 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 VASH2Q86V25 355 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 CCDC83Q8IWF9 413 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 SIDT2Q8NBJ9 832 aaKnown RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 OR6M1Q8NGM8 313 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 GOT1L1Q8NHS2 421 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 ZBED6CLQ96FA7 236 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 PNNQ9H307 717 aaKnown RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 COPS7BQ9H9Q2 264 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 RNF24Q9Y225 148 aa3.1□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF256Q9Y2P7 627 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-216ENST00000493758 SLC15A5A6NIM6 579 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 MEI4A8MW99 385 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 SLC7A4O43246 635 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 TSC22D2O75157 780 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 LY6G6DO95868 133 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 SERPINF2P08697 491 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 IGFBP5P24593 272 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 FASP25445 335 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 PPP2R1BP30154 601 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 MTIF2P46199 727 aaKnown RBP3.09□□□□□ -1.91
ITGB1-216ENST00000493758 MEOX2P50222 304 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 STX1BP61266 288 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 IGLV3-21P80748 117 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-216ENST00000493758 CDKL1Q00532 357 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 STX1AQ16623 288 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 HAGHQ16775 308 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 UNC50Q53HI1 259 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 CCDC158Q5M9N0 1113 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 DCAF12Q5T6F0 453 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 SHQ1Q6PI26 577 aaKnown RBP3.09□□□□□ -1.91
ITGB1-216ENST00000493758 GPR142Q7Z601 462 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF525Q8N782 197 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 TBCKQ8TEA7 893 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms