RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MAB21L2Q9Y586 359 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 TNS1Q9HBL0 1735 aaKnown RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 C2orf92A0A1B0GVN3 265 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 PRKYO43930 277 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ANXA5P08758 320 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF7P17097 686 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ITPKAP23677 461 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 CACNG1Q06432 222 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SEC23BQ15437 767 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 CPTPQ5TA50 214 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 FRG2Q64ET8 278 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 METAP1DQ6UB28 335 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 USP45Q70EL2 814 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ADGRG2Q8IZP9 1017 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 OTUB1Q96FW1 271 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 COQ10AQ96MF6 247 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 FRG2BQ96QU4 278 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 PKMYT1Q99640 499 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 TMEM175Q9BSA9 504 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 TMED9Q9BVK6 235 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 BEX1Q9HBH7 125 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 THSD1Q9NS62 852 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 EXTL2Q9UBQ6 330 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ENOPH1Q9UHY7 261 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SLC22A14Q9Y267 594 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 PCDHB1Q9Y5F3 818 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 KCNE1BA0A087WTH5 132 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 TRBC2A0A5B9 178 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 A8MVJ9 347 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 HNRNPCL2B2RXH8 293 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 OSMP13725 252 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 IRS1P35568 1242 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 SOX18P35713 384 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 CBX5P45973 191 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 MVDP53602 400 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 YBEYP58557 167 aaPredicted RBP11.13□□□□□ -0.63
HDAC4-210ENST00000493582 ADAM15Q13444 863 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 ALG1LQ6GMV1 187 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 LRFN4Q6PJG9 635 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 QSOX2Q6ZRP7 698 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 FAM92BQ6ZTR7 304 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 METTL23Q86XA0 190 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
HDAC4-210ENST00000493582 ZBTB2Q8N680 514 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 OR4A15Q8NGL6 344 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 OR8D4Q8NGM9 314 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 SKA2Q8WVK7 121 aaPredicted RBP11.13□□□□□ -0.63
HDAC4-210ENST00000493582 NXPE2Q96DL1 559 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 THAP7Q9BT49 309 aaPredicted RBP11.13□□□□□ -0.63
HDAC4-210ENST00000493582 SLAMF7Q9NQ25 335 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 HCN3Q9P1Z3 774 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 DSPPQ9NZW4 1301 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 TEX13CA0A0J9YWL9 993 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 A0A1B0GVM2 712 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 RRN3P2A6NIE6 340 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 DRGXA6NNA5 263 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 M0R233 179 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 KPNA5O15131 536 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 OR10H3O60404 316 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 RGS11O94810 467 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 CELF2O95319 508 aaKnown RBP11.13□□□□□ -0.63
HDAC4-210ENST00000493582 ALPIP09923 528 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 ZP3P21754 424 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 XKP51811 444 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 WNT4P56705 351 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 TWF1Q12792 350 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 PCBP1Q15365 356 aaKnown RBP eCLIP11.13□□□□□ -0.631e-6■■■■■ 29.1
HDAC4-210ENST00000493582 NTRK2Q16620 822 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 UPP1Q16831 310 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 STPG2Q8N412 459 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 HJURPQ8NCD3 748 aaPredicted RBP11.13□□□□□ -0.63
HDAC4-210ENST00000493582 OR8J1Q8NGP2 316 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 OR5AK3PQ8NH89 298 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 SORBS1Q9BX66 1292 aaKnown RBP11.13□□□□□ -0.63
HDAC4-210ENST00000493582 REG4Q9BYZ8 158 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 GPR63Q9BZJ6 419 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 MAP4K5Q9Y4K4 846 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 PCDHB7Q9Y5E2 793 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 ENPP4Q9Y6X5 453 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 LTBP3Q9NS15 1303 aa11.13□□□□□ -0.63
HDAC4-210ENST00000493582 C7orf66A4D0T2 115 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ARL5CA6NH57 179 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 DVL2O14641 736 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 RAB36O95755 333 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 POMCP01189 267 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 NR2F6P10588 404 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ATF6P18850 670 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 PSMA3P25788 255 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 BTCP35070 178 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 LIM2P55344 173 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ERVK-21P61565 698 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 CDC42EP1Q00587 391 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 C3orf38Q5JPI3 329 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 IL20RBQ6UXL0 311 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 MON1AQ86VX9 555 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 NPAS3Q8IXF0 933 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms