RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PJA1Q8NG27 643 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PSMA8Q8TAA3 256 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SFXN5Q8TD22 340 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 MAGEE2Q8TD90 523 aaPredicted RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CREB3L4Q8TEY5 395 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 HMGB4Q8WW32 186 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CYGBQ8WWM9 190 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TM4SF18Q96CE8 201 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 F2RL3Q96RI0 385 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 DPH2Q9BQC3 489 aaPredicted RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 DPH7Q9BTV6 452 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 DOHHQ9BU89 302 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TRIM8Q9BZR9 551 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 GABARAPL1Q9H0R8 117 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CHST8Q9H2A9 424 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 REEP1Q9H902 201 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PRDM8Q9NQV8 689 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 SLC6A13Q9NSD5 602 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 MS4A12Q9NXJ0 267 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PHF11Q9UIL8 331 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PADI2Q9Y2J8 665 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PCDHGB3Q9Y5G1 929 aa9.51□□□□□ -0.89
PRPF3-206ENST00000493553 PCYT1BQ9Y5K3 369 aaPredicted RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 CFAP20Q9Y6A4 193 aaKnown RBP9.51□□□□□ -0.89
PRPF3-206ENST00000493553 TRANK1O15050 2925 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 A0A0A6YYD5 115 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 A8MVJ9 347 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ISM1B1AKI9 464 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 H3BNH8 94 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SH3BP5O60239 455 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 UGT2B11O75310 529 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 AGR2O95994 175 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SLC35G6P0C7Q6 338 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 PPP2R1BP30154 601 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 CD6P30203 668 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 TLX1P31314 330 aaPredicted RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ACSL1P33121 698 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ITGA1P56199 1179 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SMIM11AP58511 58 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 YBX1P67809 324 aaKnown RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 HBA1P69905 142 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 CDK6Q00534 326 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 MEF2AQ02078 507 aaPredicted RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 RPL6Q02878 288 aaKnown RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SCARB2Q14108 478 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SIM2Q14190 667 aaPredicted RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SLC5A12Q1EHB4 618 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 IFI44LQ53G44 452 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 CYBRD1Q53TN4 286 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 CRB2Q5IJ48 1285 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 PRAMEF8Q5VWM4 474 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 PRAMEF7Q5VXH5 474 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ZNF425Q6IV72 752 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 REEP3Q6NUK4 255 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ENPP6Q6UWR7 440 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ANGPTL8Q6UXH0 198 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 Q6ZSR6 202 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 FAM92BQ6ZTR7 304 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 C22orf34Q6ZV56 151 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 OOSP2Q86WS3 158 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 KRT73Q86Y46 540 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ARMC8Q8IUR7 673 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 EPHX4Q8IUS5 362 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SPACA3Q8IXA5 215 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ARL10Q8N8L6 244 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 CAMKVQ8NCB2 501 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 TSPAN14Q8NG11 270 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 NT5CQ8TCD5 201 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 GEMIN6Q8WXD5 167 aaKnown RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 RSC1A1Q92681 617 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 DGCR14Q96DF8 476 aaKnown RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ERLEC1Q96DZ1 483 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 BMFQ96LC9 184 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ZNF607Q96SK3 696 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 EPYCQ99645 322 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 TWSG1Q9GZX9 223 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ING2Q9H160 280 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SPNS1Q9H2V7 528 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 TRIM45Q9H8W5 580 aaPredicted RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 A4GALTQ9NPC4 353 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 UBAP1Q9NZ09 502 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 TAAR2Q9P1P5 351 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 TBC1D29Q9UFV1 150 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 EXO1Q9UQ84 846 aaKnown RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 ENTPD4Q9Y227 616 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 BTBD3Q9Y2F9 522 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 FAM32AQ9Y421 112 aaKnown RBP9.5□□□□□ -0.89
PRPF3-206ENST00000493553 SPACA6W5XKT8 324 aa9.5□□□□□ -0.89
PRPF3-206ENST00000493553 PCM1Q15154 2024 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 BPTFQ12830 3046 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SPTY2D1-AS1A0A0U1RR47 76 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 A6NCN8 305 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 OR52A4PA6NMU1 304 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 C2orf74A8MZ97 194 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 H3BQ06 376 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 PDLIM1O00151 329 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 UPK1AO00322 258 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SAP18O00422 153 aaKnown RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ZSCAN9O15535 394 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms