RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 DGAT2Q96PD7 388 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 TIMP4Q99727 224 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 TBCDQ9BTW9 1192 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 CAPS2Q9BXY5 557 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 MS4A8Q9BY19 250 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 CAB39LQ9H9S4 337 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 WWOXQ9NZC7 414 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 PCDHGB3Q9Y5G1 929 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 TUBAL3A6NHL2 446 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 GOLGA6L6A8MZA4 724 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 AHRRA9YTQ3 701 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 TRIM3O75382 744 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-204ENST00000493161 C1QAP02745 245 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 CLPSP04118 112 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 EPXP11678 715 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 HIST1H1TP22492 207 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-204ENST00000493161 GDF1P27539 372 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 HPDP32754 393 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-204ENST00000493161 PEX19P40855 299 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 TGM3Q08188 693 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 MGAT5Q09328 741 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 CHIT1Q13231 466 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 SLAMF1Q13291 335 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 FASTKD3Q14CZ7 662 aaKnown RBP12.56□□□□□ -0.4
SAMM50-204ENST00000493161 PDK4Q16654 411 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 DCST1Q5T197 706 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 FBXW10Q5XX13 1052 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 C18orf63Q68DL7 685 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 LRRC8AQ8IWT6 810 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 PDIK1LQ8N165 341 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 LIX1Q8N485 282 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 C18orf12Q96KH6 178 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 GAL3ST4Q96RP7 486 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 OSBPL9Q96SU4 736 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-204ENST00000493161 DOHHQ9BU89 302 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 EFCAB11Q9BUY7 163 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 SMYD2Q9NRG4 433 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 QPCTLQ9NXS2 382 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 ZNF629Q9UEG4 869 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-204ENST00000493161 EDARQ9UNE0 448 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 MTO1Q9Y2Z2 717 aaKnown RBP12.56□□□□□ -0.4
SAMM50-204ENST00000493161 SLC6A5Q9Y345 797 aa12.56□□□□□ -0.4
SAMM50-204ENST00000493161 PHGDHO43175 533 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 CCNT2O60583 730 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 STK16O75716 305 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 SCELO95171 688 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 ACSL3O95573 720 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 COX7A2P14406 83 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 TIMP3P35625 211 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 SSR2P43308 183 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 HNRNPH2P55795 449 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 HERVK_113P63132 956 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 ERVK-8P63133 956 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 IRF8Q02556 426 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 ZNF267Q14586 743 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 POU4F3Q15319 338 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 AP5B1Q2VPB7 878 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 FNDC7Q5VTL7 733 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 SULT1C3Q6IMI6 304 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 GPSM1Q86YR5 675 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 LACC1Q8IV20 430 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 SLC15A4Q8N697 577 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 BBOF1Q8ND07 529 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 UCN3Q969E3 161 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 RBM18Q96H35 190 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 FBXL20Q96IG2 436 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 VPS39Q96JC1 886 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 ERVK-6Q9BXR3 956 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 ROGDIQ9GZN7 287 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 DERL2Q9GZP9 239 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 WWTR1Q9GZV5 400 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 OR51B5Q9H339 312 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 RPF2Q9H7B2 306 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 MOCS1Q9NZB8 636 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 CNIH4Q9P003 139 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 MTRF1LQ9UGC7 380 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 PTBP2Q9UKA9 531 aaKnown RBP12.55□□□□□ -0.4
SAMM50-204ENST00000493161 ERVK-19Q9WJR5 959 aa12.55□□□□□ -0.4
SAMM50-204ENST00000493161 NINQ8N4C6 2090 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 GOLGA6L10A0A0M3HER8 536 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 A0A1W2PS29 197 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 TP73O15350 636 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 TRAPPC6AO75865 159 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 IL2RAP01589 272 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 INHBBP09529 407 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 FREM3P0C091 2139 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CCDC166P0CW27 439 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 PCNAP12004 261 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CD1DP15813 335 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 ALOX15P16050 662 aaPredicted RBP12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CD53P19397 219 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 SERPINB3P29508 390 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 SOX18P35713 384 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 CASP2P42575 452 aa12.54□□□□□ -0.4
SAMM50-204ENST00000493161 SLC37A1P57057 533 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms