RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 WNT3AP56704 352 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 FAM3BP58499 235 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PPIAP62937 165 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 POU6F2P78424 691 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 NAAAQ02083 359 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PAX5Q02548 391 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 FOLH1Q04609 750 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TNP2Q05952 138 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CD69Q07108 199 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 STX4Q12846 297 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TRAM2Q15035 370 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PCM1Q15154 2024 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TMED2Q15363 201 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 NKG7Q16617 165 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GSTA3Q16772 222 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 KNOP1Q1ED39 458 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 KLHL12Q53G59 568 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 MBLAC2Q68D91 279 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TXNRD3NBQ6F5E7 133 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ABLIM2Q6H8Q1 611 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 DHRS7BQ6IAN0 325 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 APOBEC3HQ6NTF7 200 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 RHBDF2Q6PJF5 856 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GDPD4Q6W3E5 623 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CCNI2Q6ZMN8 369 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 FAM92BQ6ZTR7 304 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 Q6ZUG5 572 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GDPD3Q7L5L3 318 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PRRT2Q7Z6L0 340 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TRABD2AQ86V40 505 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 HPS6Q86YV9 775 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GPALPP1Q8IXQ4 340 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF34Q8IZ26 560 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 HS3ST5Q8IZT8 346 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF561Q8N587 486 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 AMER3Q8N944 861 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CCDC71LQ8N9Z2 235 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 OR52N2Q8NGI0 321 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TRMT10AQ8TBZ6 339 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SLC2A12Q8TD20 617 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CYB5D2Q8WUJ1 264 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CASKIN2Q8WXE0 1202 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 NKD2Q969F2 451 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 MRPL48Q96GC5 212 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PDXPQ96GD0 296 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 NSL1Q96IY1 281 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 AKR1E2Q96JD6 320 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 LMLNQ96KR4 655 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SPATA33Q96N06 139 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TGS1Q96RS0 853 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 NPAS1Q99742 590 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PRMT1Q99873 361 aaKnown RBP3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF559Q9BR84 538 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF251Q9BRH9 671 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CENPKQ9BS16 269 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 NICN1Q9BSH3 213 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ST6GALNAC5Q9BVH7 336 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 FSD1LQ9BXM9 530 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PBX4Q9BYU1 374 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SLC19A3Q9BZV2 496 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PCBD2Q9H0N5 130 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SPNS1Q9H2V7 528 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TRABDQ9H4I3 376 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GCM1Q9NP62 436 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 RAB18Q9NP72 206 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 MYOZ2Q9NPC6 264 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ZC4H2Q9NQZ6 224 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 CTPS2Q9NRF8 586 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 GSN-AS1Q9NRJ2 163 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ABCC13Q9NSE7 274 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 SLC2A8Q9NY64 477 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 COA4Q9NYJ1 87 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TAS2R1Q9NYW7 299 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 OPN4Q9UHM6 478 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 PHF11Q9UIL8 331 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 BTNL2Q9UIR0 455 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ARL2BPQ9Y2Y0 163 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 TESMINQ9Y4I5 508 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 MMP24Q9Y5R2 645 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 UHRF1BP1LA0JNW5 1464 aa3.99□□□□□ -1.77
BRCA1-220ENST00000492859 ZFYVE9O95405 1425 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 ST20-MTHFSA0A0A6YYL1 179 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1W2PNV4 684 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 AGAP5A6NIR3 686 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 NEURL1BA8MQ27 555 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF99A8MXY4 864 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-220ENST00000492859 KCNU1A8MYU2 1149 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 M0QZK8 103 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 FLRT2O43155 660 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 RBMXL2O75526 392 aaKnown RBP3.98□□□□□ -1.77
BRCA1-220ENST00000492859 CBX6O95503 412 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 LDOC1O95751 146 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-220ENST00000492859 MPIG6BO95866 241 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 ADAP00813 363 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 CST1P01037 141 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 RPN2P04844 631 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 SERPINB2P05120 415 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 SERPINE2P07093 398 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 CA3P07451 260 aa3.98□□□□□ -1.77
BRCA1-220ENST00000492859 NBEAP1P0C6P0 100 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms