RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 EML2O95834 649 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CHRM5P08912 532 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CHMP24386 653 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CLK1P49759 484 aaKnown RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 TFF2Q03403 129 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 UBE3AQ05086 875 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 NDUFAF5Q5TEU4 345 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ADAMTSL4Q6UY14 1074 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CROCCP3Q8IVE0 287 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 STX19Q8N4C7 294 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 DYNC2LI1Q8TCX1 351 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CHCHD6Q9BRQ6 235 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 SPATA9Q9BWV2 254 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 GLIPR2Q9H4G4 154 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 MVB12BQ9H7P6 319 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 FAIMQ9NVQ4 179 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 PSORS1C1Q9UIG5 152 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 PCDHGB1Q9Y5G3 927 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ENPP4Q9Y6X5 453 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ADORA3P0DMS8 318 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 AK4P27144 223 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CERS1P27544 350 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CCT3P49368 545 aaKnown RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 REEP5Q00765 189 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 LASP1Q14847 261 aaKnown RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CRB2Q5IJ48 1285 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 C18orf63Q68DL7 685 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 DSG4Q86SJ6 1040 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF605Q86T29 641 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 NUDT13Q86X67 352 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 RHOXF1Q8NHV9 184 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 SMPDL3AQ92484 453 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ZHX1-C8orf76Q96EF9 292 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 MYADMQ96S97 322 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 C6orf62Q9GZU0 229 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 OR51I1Q9H343 314 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ZCCHC3Q9NUD5 404 aaKnown RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 DAPK2Q9UIK4 370 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 POFUT2Q9Y2G5 429 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 KCNE3Q9Y6H6 103 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 A0A1W2PQU0 124 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 C5orf67F2Z3F1 127 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 H3BN98 237 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 DNAJB5O75953 348 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 DNTTP04053 509 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CKMT1AP12532 417 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 NCBP2P52298 156 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CXCR4P61073 352 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 HOXC5Q00444 222 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 MED22Q15528 200 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 INAQ16352 499 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 SAXO2Q658L1 398 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 TCTN3Q6NUS6 607 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CCDC116Q8IYX3 515 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 FRMD1Q8N878 549 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 SIMC1Q8NDZ2 872 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 OR52E1Q8NGJ3 308 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 OR2A1Q8NGT9 310 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CCL4L1Q8NHW4 92 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 PHOSPHO2Q8TCD6 241 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 SETD7Q8WTS6 366 aaKnown RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 UBE2E3Q969T4 207 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 C16orf58Q96GQ5 468 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 Q96MT0 163 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ITPAQ9BY32 194 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 HDAC8Q9BY41 377 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 DCSTAMPQ9H295 470 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 C6orf106Q9H6K1 298 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF556Q9HAH1 456 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 SEMA3GQ9NS98 782 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 TRNAU1APQ9NX07 287 aaKnown RBP11.8□□□□□ -0.52
HMGN1-220ENST00000492280 FBXL12Q9NXK8 326 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 HSPE1-MOB4S4R3N1 261 aa11.8□□□□□ -0.52
HMGN1-220ENST00000492280 CLCA1A8K7I4 914 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 CLDN25C9JDP6 229 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 AIREO43918 545 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 GABRB1P18505 474 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 CBLP22681 906 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 PPP2CBP62714 309 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 PPP2CAP67775 309 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 RBBP4Q09028 425 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 ARMC8Q8IUR7 673 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 SVOPQ8N4V2 548 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF675Q8TD23 568 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 TRUB1Q8WWH5 349 aaKnown RBP11.79□□□□□ -0.52
HMGN1-220ENST00000492280 NEURL3Q96EH8 262 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 PDXPQ96GD0 296 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 CAMK1GQ96NX5 476 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 TREX2Q9BQ50 279 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-220ENST00000492280 SLC6A20Q9NP91 592 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 AKIP1Q9NQ31 210 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 THSD1Q9NS62 852 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 SPATA7Q9P0W8 599 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 SEC14L3Q9UDX4 400 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 HCN4Q9Y3Q4 1203 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 ATG4BQ9Y4P1 393 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 PNMA8CA0A1B0GUJ8 204 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms