RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 NBEAL1Q6ZS30 2694 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 C15orf38-AP3S2A0A0A6YYH1 394 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 ANKDD1BA6NHY2 528 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 WASHC1A8K0Z3 465 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 SIAH2O43255 324 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 EPORP19235 508 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 GSTM2P28161 218 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 SLCO1A2P46721 670 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 STT3AP46977 705 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 SORDQ00796 357 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 DMTNQ08495 405 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 FOXF2Q12947 444 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 SERTAD2Q14140 314 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 SHEQ5VZ18 495 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 FBXW10Q5XX13 1052 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 VASNQ6EMK4 673 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 CCDC137Q6PK04 289 aaKnown RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 TMEM64Q6YI46 380 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 RASGEF1CQ8N431 466 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 ACOT4Q8N9L9 421 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 FAM13CQ8NE31 585 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 NTNG2Q96CW9 530 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 TRIM44Q96DX7 344 aaPredicted RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 JSRP1Q96MG2 331 aaPredicted RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 EGFL8Q99944 293 aa12.11□□□□□ -0.47
USF1-206ENST00000491629 SORBS1Q9BX66 1292 aaKnown RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 ZNF395Q9H8N7 513 aaPredicted RBP12.11□□□□□ -0.47
USF1-206ENST00000491629 A0A088AWK7 358 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 SYNDIG1LA6NDD5 238 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 NCF1BA6NI72 391 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 NCF1CA8MVU1 366 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 H7C1Q1 480 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 SH3BGRLO75368 114 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 PRKRAO75569 313 aaKnown RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 SCELO95171 688 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 WISP3O95389 354 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 ACSL3O95573 720 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 TTC4O95801 387 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 IL2RAP01589 272 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 NCF1P14598 390 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 GDF1P27539 372 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 PCSK6P29122 969 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 HNMTP50135 292 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 TAS2R39P59534 338 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 DOC2AQ14183 400 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 NTRK2Q16620 822 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 Q5PR19 223 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 HP1BP3Q5SSJ5 553 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 PLXDC2Q6UX71 529 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 CXXC5Q7LFL8 322 aaKnown RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 KIF18BQ86Y91 864 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 KRT78Q8N1N4 520 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 LIX1Q8N485 282 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 SLC15A4Q8N697 577 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 C9orf106Q8NAJ2 232 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 SLC22A8Q8TCC7 542 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 ANKRD7Q92527 254 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 WDR34Q96EX3 536 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 MS4A8Q9BY19 250 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 UGT2B28Q9BY64 529 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 PITHD1Q9GZP4 211 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 EHD1Q9H4M9 534 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 COPS7BQ9H9Q2 264 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 CNIH4Q9P003 139 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 COPS7AQ9UBW8 275 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 CORO1CQ9ULV4 474 aaPredicted RBP12.1□□□□□ -0.47
USF1-206ENST00000491629 CR1P17927 2039 aa12.1□□□□□ -0.47
USF1-206ENST00000491629 CD8B2A6NJW9 211 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 EEF1E1-BLOC1S5C9J1V9 151 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 DYNC1I1O14576 645 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 EEF1E1O43324 174 aaKnown RBP12.09□□□□□ -0.47
USF1-206ENST00000491629 HPNP05981 417 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 BMP7P18075 431 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 CTSSP25774 331 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 IVDP26440 423 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 GGT5P36269 586 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 KCNC1P48547 511 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 CDK9P50750 372 aaKnown RBP12.09□□□□□ -0.47
USF1-206ENST00000491629 SLC37A1P57057 533 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 RCN2Q14257 317 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 EBPQ15125 230 aaKnown RBP12.09□□□□□ -0.47
USF1-206ENST00000491629 TGFBIQ15582 683 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 EIPR1Q53HC9 387 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 NHSL2Q5HYW2 709 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 STEAP4Q687X5 459 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 C18orf63Q68DL7 685 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 ZC3HC1Q86WB0 502 aaKnown RBP12.09□□□□□ -0.47
USF1-206ENST00000491629 GAS2L3Q86XJ1 694 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 ZNF441Q8N8Z8 693 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms