RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 IPPKQ9H8X2 491 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 ACTR8Q9H981 624 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 NMRAL1Q9HBL8 299 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 LYRM4Q9HD34 91 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 TIMMDC1Q9NPL8 285 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 ACOT9Q9Y305 439 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 UTP11Q9Y3A2 253 aaKnown RBP8.22□□□□□ -1.09
HDAC3-211ENST00000491581 FAM215AQ9Y5M1 114 aa8.22□□□□□ -1.09
HDAC3-211ENST00000491581 A0A0A6YYD5 115 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 A0A0G2JNJ9 132 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 LRRC3CA6NJW4 275 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ENO4A6NNW6 628 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 E9PLN8 166 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 POC1B-GALNT4F8VUJ3 575 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 PROM1O43490 865 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 KLK8O60259 260 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 URI1O94763 535 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 TOXO94900 526 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 SCELO95171 688 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 CHN1P15882 459 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 EPB42P16452 691 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 STX2P32856 288 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ARL1P40616 181 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 STT3AP46977 705 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 SMSP52788 366 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 FBXW4P57775 412 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 IGLV3-21P80748 117 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 TFF3Q07654 80 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 DUSP8Q13202 625 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 LAPTM5Q13571 262 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 TERF2Q15554 542 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 HIST2H2ACQ16777 129 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF791Q3KP31 576 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 PAGE2BQ5JRK9 111 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 HIST2H2AA3Q6FI13 130 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 MRM1Q6IN84 353 aaKnown RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 NIPAL1Q6NVV3 410 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 C8orf74Q6P047 294 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 CYS1Q717R9 158 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF572Q7Z3I7 529 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 GDF7Q7Z4P5 450 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 GPR180Q86V85 440 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 FAM13CQ8NE31 585 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 OR14A16Q8NHC5 309 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 WDR20Q8TBZ3 569 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 CA5BP1Q8WTZ4 195 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 IFT81Q8WYA0 676 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF592Q92610 1267 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 CMTM7Q96FZ5 175 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 JSRP1Q96MG2 331 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 DGAT2Q96PD7 388 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 VKORC1Q9BQB6 163 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 CAPS2Q9BXY5 557 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 RAB17Q9H0T7 212 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ZDHHC11Q9H8X9 412 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 CLK4Q9HAZ1 481 aaKnown RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ALKBH4Q9NXW9 302 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 XPR1Q9UBH6 696 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 Q9UFV3 132 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.1
HDAC3-211ENST00000491581 ANGPTL3Q9Y5C1 460 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 OTOGQ6ZRI0 2925 aa8.21□□□□□ -1.1
HDAC3-211ENST00000491581 A0A087X1B8 175 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 KLHL2O95198 593 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 GSTA2P09210 222 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 FAM58BPP0C7Q3 252 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CTAGE8P0CG41 777 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 GLI4P10075 376 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 ALOX15P16050 662 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CNR1P21554 472 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 GCAP28676 217 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CRABP2P29373 138 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 TYK2P29597 1187 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 DLX5P56178 289 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 TLE4Q04727 773 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 TRAF3Q13114 568 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 EXOSC7Q15024 291 aaKnown RBP8.2□□□□□ -1.1
HDAC3-211ENST00000491581 EBPQ15125 230 aaKnown RBP8.2□□□□□ -1.1
HDAC3-211ENST00000491581 LTB4RQ15722 352 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 PIGGQ5H8A4 983 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CDKL4Q5MAI5 379 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 DCST1Q5T197 706 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 FAM111BQ6SJ93 734 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 RTL4Q6ZR62 310 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 SEM1Q6ZVN7 128 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CHSY3Q70JA7 882 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 TRILQ7L0X0 811 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CTAGE4Q8IX94 777 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 GSPT2Q8IYD1 628 aaKnown RBP8.2□□□□□ -1.1
HDAC3-211ENST00000491581 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 OR4F6Q8NGB9 312 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 DAZLQ92904 295 aaKnown RBP8.2□□□□□ -1.1
HDAC3-211ENST00000491581 RGMAQ96B86 450 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 SMC6Q96SB8 1091 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 WWTR1Q9GZV5 400 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 ENKD1Q9H0I2 346 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 LIME1Q9H400 295 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 SH2D2AQ9NP31 389 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 EHD3Q9NZN3 535 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 342 ms