RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 AP3M1Q9Y2T2 418 aa14.8□□□□□ -0.04
PCCB-218ENST00000490504 MDC1Q14676 2089 aaKnown RBP14.8□□□□□ -0.04
PCCB-218ENST00000490504 TRBV5-3A0A0A0MS03 114 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 H3BMH7 237 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 H3BNX3 289 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 ZIC2O95409 532 aaPredicted RBP14.79□□□□□ -0.04
PCCB-218ENST00000490504 GSTM2P28161 218 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 DEPDC1Q5TB30 811 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 FAM69BQ5VUD6 431 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 CAMKMTQ7Z624 323 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 TMEM132CQ8N3T6 1108 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 TBC1D19Q8N5T2 526 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 SLC22A18Q96BI1 424 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 ABHD17AQ96GS6 310 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 LRGUKQ96M69 825 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 PRPF18Q99633 342 aaKnown RBP14.79□□□□□ -0.04
PCCB-218ENST00000490504 SH3GL1Q99961 368 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 REXO4Q9GZR2 422 aaKnown RBP14.79□□□□□ -0.04
PCCB-218ENST00000490504 CHRNA10Q9GZZ6 450 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 MYNNQ9NPC7 610 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 ACTR3BQ9P1U1 418 aa14.79□□□□□ -0.04
PCCB-218ENST00000490504 SUV39H1O43463 412 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 CLEC3AO75596 197 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 TBX6O95947 436 aaPredicted RBP14.78□□□□□ -0.04
PCCB-218ENST00000490504 RPL3P39023 403 aaKnown RBP14.78□□□□□ -0.04
PCCB-218ENST00000490504 VHLP40337 213 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 TRPC1P48995 793 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 MTPNP58546 118 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 IL10RAQ13651 578 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 SELPLGQ14242 412 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 RUNDC3AQ59EK9 446 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 CPTPQ5TA50 214 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 LCN8Q6JVE9 175 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 FAM198BQ6UWH4 519 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 DNAJC14Q6Y2X3 702 aaPredicted RBP14.78□□□□□ -0.04
PCCB-218ENST00000490504 PAGE2Q7Z2X7 111 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 MSRB3Q8IXL7 192 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 DNAJC22Q8N4W6 341 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 C9orf43Q8TAL5 461 aaPredicted RBP14.78□□□□□ -0.04
PCCB-218ENST00000490504 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCCB-218ENST00000490504 C16orf78Q8WTQ4 265 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 N4BP2L2Q92802 583 aaPredicted RBP14.78□□□□□ -0.04
PCCB-218ENST00000490504 CENPKQ9BS16 269 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 DPH7Q9BTV6 452 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 DUSP26Q9BV47 211 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 SLC7A5P2Q9GIP4 190 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 ATP6V1HQ9UI12 483 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 SNX7Q9UNH6 387 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 SNX13Q9Y5W8 968 aa14.78□□□□□ -0.04
PCCB-218ENST00000490504 TCRBV3S1A0A5B6 114 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 PLPP1O14494 284 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 RFXANKO14593 260 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 NDUFS4O43181 175 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 LCMT2O60294 686 aaKnown RBP14.77□□□□□ -0.04
PCCB-218ENST00000490504 OR2B3O76000 313 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 KLK1P06870 262 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 RAB40ALP0C0E4 278 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 HOXB9P17482 250 aaPredicted RBP14.77□□□□□ -0.04
PCCB-218ENST00000490504 MAGP20916 626 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 HTR1EP28566 365 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 WNT3P56703 355 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 ANXA8L1Q5VT79 327 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 ZNF385CQ66K41 422 aaPredicted RBP14.77□□□□□ -0.04
PCCB-218ENST00000490504 CYP2R1Q6VVX0 501 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 IKBIPQ70UQ0 350 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 R3HCC1LQ7Z5L2 792 aaKnown RBP14.77□□□□□ -0.04
PCCB-218ENST00000490504 ANKRD46Q86W74 232 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 IFNEQ86WN2 208 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 GPR135Q8IZ08 494 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 NRG4Q8WWG1 115 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 QRFPRQ96P65 431 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 GBP5Q96PP8 586 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 F2RL3Q96RI0 385 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 ECSITQ9BQ95 431 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 TACO1Q9BSH4 297 aaKnown RBP14.77□□□□□ -0.04
PCCB-218ENST00000490504 INPP5KQ9BT40 448 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 SARGQ9BW04 601 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 TRIM4Q9C037 500 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 REEP4Q9H6H4 257 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 SLC25A37Q9NYZ2 338 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 EGFL7Q9UHF1 273 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 PCDHB14Q9Y5E9 798 aa14.77□□□□□ -0.04
PCCB-218ENST00000490504 AQP12BA6NM10 295 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 GABRR3A8MPY1 467 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 K7EM74 188 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 HAT1O14929 419 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 ARPC2O15144 300 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 SCN2BO60939 215 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 GBAP04062 536 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 LAMP1P11279 417 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 PIM1P11309 404 aaPredicted RBP14.77□□□□□ -0.05
PCCB-218ENST00000490504 ATP6V1B2P21281 511 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 AHRP35869 848 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 BCL6P41182 706 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 LRRC74AQ0VAA2 488 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 FXNQ16595 210 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 FAM71E1Q6IPT2 247 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 ZNF425Q6IV72 752 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 PLD3Q8IV08 490 aa14.77□□□□□ -0.05
PCCB-218ENST00000490504 AQP12AQ8IXF9 295 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms