RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 DOLPP1Q86YN1 238 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 CPSF7Q8N684 471 aaKnown RBP9.64□□□□□ -0.87
TTC28-207ENST00000490475 AMER2Q8N7J2 671 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 MORN4Q8NDC4 146 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 OR14A16Q8NHC5 309 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 FAM57AQ8TBR7 257 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 ZNF473Q8WTR7 871 aaKnown RBP9.64□□□□□ -0.87
TTC28-207ENST00000490475 CHTF18Q8WVB6 975 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 ASB15Q8WXK1 588 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 SGCZQ96LD1 299 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 MTERF1Q99551 399 aaKnown RBP9.64□□□□□ -0.87
TTC28-207ENST00000490475 SH3GL2Q99962 352 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 TBCDQ9BTW9 1192 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 TSPAN10Q9H1Z9 355 aaPredicted RBP9.64□□□□□ -0.87
TTC28-207ENST00000490475 TP63Q9H3D4 680 aaPredicted RBP9.64□□□□□ -0.87
TTC28-207ENST00000490475 MS4A12Q9NXJ0 267 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 LGALS13Q9UHV8 139 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 PPT2Q9UMR5 302 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 DAPP1Q9UN19 280 aa9.64□□□□□ -0.87
TTC28-207ENST00000490475 CCDC168Q8NDH2 2452 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 OR14I1A6ND48 311 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 A8MUA0 341 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 G3V2L1 256 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 SAP18O00422 153 aaKnown RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 COPEO14579 308 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 PLIN3O60664 434 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 SUPT7LO94864 414 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 CLDN9O95484 217 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 PROCP04070 461 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 IFNA16P05015 189 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 TPOP07202 933 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 RPS17P08708 135 aaKnown RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 IMPDH1P20839 514 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ATP5F1P24539 256 aaPredicted RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 PPP2R1BP30154 601 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 CRHR1P34998 444 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ARL1P40616 181 aaPredicted RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 CCNG1P51959 295 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ARFIP1P53367 373 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 PRKAA2P54646 552 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 HERVK_113P63132 956 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 RUNX2Q13950 521 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ZNF678Q5SXM1 525 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ZNF468Q5VIY5 522 aaPredicted RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 ABHD17CQ6PCB6 329 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 OPN5Q6U736 354 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ACAD11Q709F0 780 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 CHSY3Q70JA7 882 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 MILR1Q7Z6M3 343 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 TRABD2AQ86V40 505 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 SLC22A16Q86VW1 577 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 SULF2Q8IWU5 870 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 DND1Q8IYX4 353 aaKnown RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 CNPY4Q8N129 248 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 L3MBTL4Q8NA19 623 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 GOLM1Q8NBJ4 401 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 PSD4Q8NDX1 1056 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 HUS1BQ8NHY5 278 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 TRPC4APQ8TEL6 797 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ZNF483Q8TF39 744 aaPredicted RBP9.63□□□□□ -0.87
TTC28-207ENST00000490475 NCLNQ969V3 563 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ART5Q96L15 291 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 LURAP1Q96LR2 239 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 QRFPRQ96P65 431 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 DMRTA2Q96SC8 542 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 NTMT1Q9BV86 223 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 TMEM109Q9BVC6 243 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 C1QTNF3Q9BXJ4 246 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 ERVK-6Q9BXR3 956 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 OR51B5Q9H339 312 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 PRDM7Q9NQW5 492 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.63□□□□□ -0.87
TTC28-207ENST00000490475 MYOTQ9UBF9 498 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 COPS7AQ9UBW8 275 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 VTI1BQ9UEU0 232 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 GRID1Q9ULK0 1009 aa9.63□□□□□ -0.87
TTC28-207ENST00000490475 PHF3Q92576 2039 aaKnown RBP9.62□□□□□ -0.87
TTC28-207ENST00000490475 FAM47E-STBD1D6RA91 191 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 H0YIV9 168 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 RTCAO00442 366 aaKnown RBP9.62□□□□□ -0.87
TTC28-207ENST00000490475 CYR61O00622 381 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 UGDHO60701 494 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 GLRA3O75311 464 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 SPAG7O75391 227 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 MYL2P10916 166 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 CREB1P16220 341 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 CHRNB4P30926 498 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 TLX1P31314 330 aaPredicted RBP9.62□□□□□ -0.87
TTC28-207ENST00000490475 GPR143P51810 404 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 LIM2P55344 173 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 PHEXP78562 749 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 PLGLB1Q02325 96 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 CLCQ05315 142 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 ZNF844Q08AG5 666 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 TRAF3Q13114 568 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 AP5B1Q2VPB7 878 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 CCDC153Q494R4 210 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms