RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PLXDC1Q8IUK5 500 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 ARL14Q8N4G2 192 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 PROKR1Q8TCW9 393 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 TMEM41AQ96HV5 264 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 LRP6O75581 1613 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 TRAPPC13A5PLN9 417 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 VSTM2BA6NLU5 285 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 DUX1O43812 170 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 ADAP00813 363 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 LPLP06858 475 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 FGF4P08620 206 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 CHRNA4P43681 627 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 MEF2AQ02078 507 aaPredicted RBP8.49□□□□□ -1.05
LSAMP-205ENST00000490035 GFOD2Q3B7J2 385 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 RBM12BQ8IXT5 1001 aaKnown RBP8.49□□□□□ -1.05
LSAMP-205ENST00000490035 SPIN2AQ99865 258 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 SPIN2BQ9BPZ2 258 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 MTG2Q9H4K7 406 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 FXYD6-FXYD2A0A087WZ82 144 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 C6orf47O95873 294 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 MT-CO2P00403 227 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 NDUFV2P19404 249 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 KDELR2P33947 212 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 CAMK2DQ13557 499 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 SPHARQ15513 63 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 SLC18B1Q6NT16 456 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 TXNDC5Q8NBS9 432 aaKnown RBP8.49□□□□□ -1.05
LSAMP-205ENST00000490035 CNN2Q99439 309 aaKnown RBP8.49□□□□□ -1.05
LSAMP-205ENST00000490035 FXYD6Q9H0Q3 95 aa8.49□□□□□ -1.05
LSAMP-205ENST00000490035 PNMTP11086 282 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 FGF3P11487 239 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 RPS3P23396 243 aaKnown RBP eCLIP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 MAP2K3P46734 347 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TAS2R31P59538 309 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 NKX3-2P78367 333 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 NPRL3Q12980 569 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 MOGSQ13724 837 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PITRM1Q5JRX3 1037 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 Q8N402 240 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 RTP4Q96DX8 246 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 INPP5EQ9NRR6 644 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF536O15090 1300 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 BLOC1S5-TXNDC5H3BN57 136 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 I3L521 148 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 J3KR12 359 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CHRM1P11229 460 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 IFNGR1P15260 489 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 GRM2Q14416 872 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 NKAPLQ5M9Q1 402 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PGM2L1Q6PCE3 622 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ABHD12BQ7Z5M8 362 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 DNAJC22Q8N4W6 341 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 WACQ9BTA9 647 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 MTHFD2LQ9H903 347 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CICQ96RK0 1608 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CASC3O15234 703 aaKnown RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CSTAP01040 98 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 C5AR1P21730 350 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 WASP42768 502 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 DGKQP52824 942 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ARHGAP19Q14CB8 494 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 RNF11Q9Y3C5 154 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 KLRG2A4D1S0 409 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 INMT-MINDY4F8WBC2 141 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 FZD9O00144 591 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 MAT2AP31153 395 aaKnown RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PSPHP78330 225 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CLDN10P78369 228 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PHF19Q5T6S3 580 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 Q6ZVU0 165 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 GPR150Q8NGU9 434 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CCSER2Q9H7U1 834 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 NDRG2Q9UN36 371 aaKnown RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TCRBV7S3A2A0A539 114 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 GPR37L1O60883 481 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 H2AFB2P0C5Z0 115 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF35P13682 527 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 HTR3AP46098 478 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TRA2BP62995 288 aaKnown RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PMS2P3Q13401 168 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF423Q2M1K9 1284 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 WDR53Q7Z5U6 358 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TEX26Q8N6G2 289 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 HMGB4Q8WW32 186 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 DDIT4LQ96D03 193 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PGAP3Q96FM1 320 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 NSUN3Q9H649 340 aaKnown RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TAS2R3Q9NYW6 316 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 MIA3Q5JRA6 1907 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 B4DGG1 531 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 INPPL1O15357 1258 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CD1DP15813 335 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PPP5CP53041 499 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CREB5Q02930 508 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 RAB31Q13636 194 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 VEZF1Q14119 521 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PMEPA1Q969W9 287 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms