RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SYT5O00445 386 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 DYRK3O43781 588 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 PRKRAO75569 313 aaKnown RBP14.6□□□□□ -0.07
PLOD3-216ENST00000489927 LRATO95237 230 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 STMN1P16949 149 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 KLK2P20151 261 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 GMPRP36959 345 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 PLIN5Q00G26 463 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 ILF2Q12905 390 aaKnown RBP14.6□□□□□ -0.07
PLOD3-216ENST00000489927 SLAMF1Q13291 335 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 KHDRBS2Q5VWX1 349 aaKnown RBP14.6□□□□□ -0.07
PLOD3-216ENST00000489927 OR4C11Q6IEV9 310 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 MED27Q6P2C8 311 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 LRRC70Q7Z2Q7 622 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 CREG2Q8IUH2 290 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 RNF175Q8N4F7 328 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 SLC15A4Q8N697 577 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 RELL2Q8NC24 303 aaPredicted RBP14.6□□□□□ -0.07
PLOD3-216ENST00000489927 C7orf57Q8NEG2 295 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 OR7G3Q8NG95 312 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 NEIL3Q8TAT5 605 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 UBE2E3Q969T4 207 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 CMTM7Q96FZ5 175 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 RMND5BQ96G75 393 aaPredicted RBP14.6□□□□□ -0.07
PLOD3-216ENST00000489927 JSRP1Q96MG2 331 aaPredicted RBP14.6□□□□□ -0.07
PLOD3-216ENST00000489927 GAL3ST4Q96RP7 486 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 GPR22Q99680 433 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 ACKR4Q9NPB9 350 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 PCDHGB3Q9Y5G1 929 aa14.6□□□□□ -0.07
PLOD3-216ENST00000489927 PRRC2AP48634 2157 aaKnown RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 HSPB2A8KAH6 182 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 EFCAB8A8MWE9 144 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 ZSCAN12O43309 604 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 S100BP04271 92 aaPredicted RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 FBXO45P0C2W1 286 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 ALOX15P16050 662 aaPredicted RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 HOXB4P17483 251 aaPredicted RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 BMP5P22003 454 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 SSTR1P30872 391 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 RPL21P46778 160 aaKnown RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 TRPC1P48995 793 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 PPP2R2AP63151 447 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 TNFRSF17Q02223 184 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 TBL3Q12788 808 aaKnown RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 CBLBQ13191 982 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 ZKSCAN8Q15776 578 aaPredicted RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 HSPB2Q16082 182 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 DEPDC1Q5TB30 811 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 C18orf63Q68DL7 685 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 GPR180Q86V85 440 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 DND1Q8IYX4 353 aaKnown RBP14.59□□□□□ -0.07
PLOD3-216ENST00000489927 LIX1Q8N485 282 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 NAXEQ8NCW5 288 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 TANKQ92844 425 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 ART5Q96L15 291 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 RBBP8Q99708 897 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 CPNE1Q99829 537 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 SH3GL2Q99962 352 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 MS4A12Q9NXJ0 267 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 CNIH4Q9P003 139 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 TXNDC16Q9P2K2 825 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 PLEKHA6Q9Y2H5 1048 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 SNX24Q9Y343 169 aa14.59□□□□□ -0.07
PLOD3-216ENST00000489927 A6NNC1 897 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 KDM4EB2RXH2 506 aaPredicted RBP14.58□□□□□ -0.08
PLOD3-216ENST00000489927 PROM1O43490 865 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 SERPINB1P30740 379 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 PEX19P40855 299 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 HNRNPH2P55795 449 aaKnown RBP14.58□□□□□ -0.08
PLOD3-216ENST00000489927 WNT3P56703 355 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 RAB10P61026 200 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 HERVK_113P63132 956 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 ERVK-8P63133 956 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 BIKQ13323 160 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 DDX39BQ13838 428 aaKnown RBP14.58□□□□□ -0.08
PLOD3-216ENST00000489927 SLC29A4Q7RTT9 530 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 CDC20BQ86Y33 519 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 ST13P4Q8IZP2 240 aaPredicted RBP14.58□□□□□ -0.08
PLOD3-216ENST00000489927 TNIP2Q8NFZ5 429 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 HUS1BQ8NHY5 278 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 PYROXD1Q8WU10 500 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 CDKL2Q92772 493 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 RGMAQ96B86 450 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 DOHHQ9BU89 302 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 ERVK-6Q9BXR3 956 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 WWTR1Q9GZV5 400 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 ALG9Q9H6U8 611 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.58□□□□□ -0.08
PLOD3-216ENST00000489927 QPCTLQ9NXS2 382 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 NUDT4Q9NZJ9 180 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 PHF11Q9UIL8 331 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 CNOT11Q9UKZ1 510 aaKnown RBP14.58□□□□□ -0.08
PLOD3-216ENST00000489927 ERVK-19Q9WJR5 959 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 NCKAP5O14513 1909 aa14.58□□□□□ -0.08
PLOD3-216ENST00000489927 C15orf38-AP3S2A0A0A6YYH1 394 aa14.57□□□□□ -0.08
PLOD3-216ENST00000489927 IQANK1A0A1B0GTG1 560 aa14.57□□□□□ -0.08
PLOD3-216ENST00000489927 TCRBV9S1A1TA0A576 114 aa14.57□□□□□ -0.08
PLOD3-216ENST00000489927 WASHC1A8K0Z3 465 aa14.57□□□□□ -0.08
PLOD3-216ENST00000489927 PLPP1O14494 284 aa14.57□□□□□ -0.08
PLOD3-216ENST00000489927 DVL2O14641 736 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms