RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CRISP1P54107 249 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 PCBP3P57721 371 aaKnown RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 LASP1Q14847 261 aaKnown RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 UBE2UQ5VVX9 321 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 PNCKQ6P2M8 343 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 PDZD3Q86UT5 571 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 ZNF557Q8N988 423 aaPredicted RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 ZNF784Q8NCA9 323 aaPredicted RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 ZG16BQ96DA0 208 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 TEFMQ96QE5 360 aaKnown RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 MGLLQ99685 303 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 TMEM38AQ9H6F2 299 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 PRSS16Q9NQE7 514 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 TMCC3Q9ULS5 477 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 HMGN4O00479 90 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 PGRMC2O15173 223 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 CNOT3O75175 753 aaKnown RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 SERPINB7O75635 380 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 DLGAP3O95886 979 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 PORP16435 677 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 GAB4Q2WGN9 574 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 CRB2Q5IJ48 1285 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 TANGO2Q6ICL3 276 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 PSRC1Q6PGN9 363 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 LRRTM4Q86VH4 590 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 SLC7A13Q8TCU3 470 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 ARMC5Q96C12 935 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 VMP1Q96GC9 406 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 TREX2Q9BQ50 279 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 CNPPD1Q9BV87 410 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 MS4A8Q9BY19 250 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 MROQ9BYG7 248 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 SPATA7Q9P0W8 599 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 IL20RAQ9UHF4 553 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 OSGIN1Q9UJX0 560 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 HCN2Q9UL51 889 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 ZSCAN9O15535 394 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 KIAA0513O60268 411 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 DNAJB5O75953 348 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 CD40LGP29965 261 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 BUD31P41223 144 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 PIK3CBP42338 1070 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 RBBP4Q09028 425 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 FAM43BQ6ZT52 329 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 SLC46A3Q7Z3Q1 461 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 TRIM73Q86UV7 250 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 SHISA5Q8N114 240 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 OTUB2Q96DC9 234 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 C16orf58Q96GQ5 468 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 INSM2Q96T92 566 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 DPH7Q9BTV6 452 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 CDADC1Q9BWV3 514 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 KLHL25Q9H0H3 589 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 AHSPQ9NZD4 102 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 NFKBIL1Q9UBC1 381 aaPredicted RBP14.9□□□□□ -0.02
BRD9-208ENST00000489816 PTPRSQ13332 1948 aa14.9□□□□□ -0.02
BRD9-208ENST00000489816 SYNDIG1LA6NDD5 238 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 CAPN5O15484 640 aaPredicted RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 EFCAB14O75071 495 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 IFNA14P01570 189 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 RPLP0P05388 317 aaKnown RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 RB1P06400 928 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 HOXB6P17509 224 aaKnown RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 GABRB1P18505 474 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 CBLP22681 906 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 HEPACAMQ14CZ8 416 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 DCST1Q5T197 706 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 NDUFAF5Q5TEU4 345 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 SPATC1Q76KD6 591 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 TMEM145Q8NBT3 493 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 SMPDL3AQ92484 453 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 METTL2AQ96IZ6 378 aaKnown RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 FAM83CQ9BQN1 747 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 OR51I1Q9H343 314 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 DPEP2Q9H4A9 486 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 GPR52Q9Y2T5 361 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 KCNE3Q9Y6H6 103 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 PSMD11O00231 422 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 SLC31A1O15431 190 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 KDM1AO60341 852 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 MFN2O95140 757 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 RHCEP18577 417 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 CD97P48960 835 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 CCR8P51685 355 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 TPRG1LQ5T0D9 272 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 SHFQ7M4L6 423 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 S100ZQ8WXG8 99 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 COL26A1Q96A83 441 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 PPP1R16AQ96I34 528 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 SPATA9Q9BWV2 254 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 PALMDQ9NP74 551 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 INIPQ9NRY2 104 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 SIRT3Q9NTG7 399 aaPredicted RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 ERVK13-1Q9NX77 482 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 GPSM3Q9Y4H4 160 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 WDR87Q6ZQQ6 2873 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 TLX2O43763 284 aaPredicted RBP14.89□□□□□ -0.03
BRD9-208ENST00000489816 SSX4O60224 188 aa14.89□□□□□ -0.03
BRD9-208ENST00000489816 AZGP1P25311 298 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms