RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 C1orf109Q9NX04 203 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 ASIC5Q9NY37 505 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 VPS29Q9UBQ0 182 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 DLGAP4Q9Y2H0 992 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 COPG1Q9Y678 874 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 DYTNA2CJ06 578 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF860A6NHJ4 632 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 E9PBE3 544 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 SAP18O00422 153 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 RTCAO00442 366 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 ANKRD28O15084 1053 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 RGS14O43566 566 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 EEDO75530 441 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 SEMA3DO95025 777 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 SCELO95171 688 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 UNC5CO95185 931 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 FHP07954 510 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF888P0CJ79 500 aaPredicted RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 CD1EP15812 388 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 TACR1P25103 407 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 PTX3P26022 381 aaPredicted RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 TPP2P29144 1249 aaPredicted RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 ZFP36L2P47974 494 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 UQCRFS1P47985 274 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 EFNA3P52797 238 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 DIO3P55073 304 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 STXBP1P61764 594 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 KRT72Q14CN4 511 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 NR6A1Q15406 480 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 SMU1Q2TAY7 513 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 AP5B1Q2VPB7 878 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 TOR1AIP1Q5JTV8 583 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 FHL5Q5TD97 284 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 METTL21CQ5VZV1 264 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 PLAG1Q6DJT9 500 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 GALNT18Q6P9A2 607 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 ABHD17CQ6PCB6 329 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 COMMD6Q7Z4G1 85 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 ANKRD37Q7Z713 158 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 FITM2Q8N6M3 262 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 C1orf52Q8N6N3 182 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 PLPP5Q8NEB5 264 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 CEP70Q8NHQ1 597 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 UTP15Q8TED0 518 aaKnown RBP9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 TBC1D20Q96BZ9 403 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 KLHL29Q96CT2 875 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 TUBGCP3Q96CW5 907 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 PEX11GQ96HA9 241 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 MARK4Q96L34 752 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 SERPINI1Q99574 410 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 MYLK2Q9H1R3 596 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 LRTM1Q9HBL6 345 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 PRDM7Q9NQW5 492 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 AGPAT4Q9NRZ5 378 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 LANCL2Q9NS86 450 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 ASF1BQ9NVP2 202 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 PTGFRNQ9P2B2 879 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 TEKT2Q9UIF3 430 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 TRIM33Q9UPN9 1127 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 CSAG2Q9Y5P2 127 aa9.9□□□□□ -0.82
SCAMP4-208ENST00000489554 A0A0G2JN53 185 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 CHST10O43529 356 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 DNAJB6O75190 326 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 SEC24DO94855 1032 aaPredicted RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 UBOX5O94941 541 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ITGAMP11215 1152 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 LBPP18428 481 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 SDC1P18827 310 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 MRPL19P49406 292 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ARFIP1P53367 373 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ERVK-8P63133 956 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 RPL38P63173 70 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ARG2P78540 354 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 RHAGQ02094 409 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 EMX2Q04743 252 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 NSDHLQ15738 373 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 EXT1Q16394 746 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 IMPG1Q17R60 797 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 BTBD16Q32M84 506 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ATP6AP1LQ52LC2 224 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 TMEM35AQ53FP2 167 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ABHD17BQ5VST6 288 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 MRM1Q6IN84 353 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 RPUSD3Q6P087 351 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 LANCL3Q6ZV70 420 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 CLNKQ7Z7G1 428 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 C10orf67Q8IYJ2 551 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ARHGAP24Q8N264 748 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 SIRT6Q8N6T7 355 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 OR2L5Q8NG80 312 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 OR5T3Q8NGG3 340 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 HAS2Q92819 552 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 GAL3ST3Q96A11 431 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 ERP27Q96DN0 273 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 NSL1Q96IY1 281 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 METTL2AQ96IZ6 378 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 PPP3R2Q96LZ3 170 aa9.89□□□□□ -0.83
SCAMP4-208ENST00000489554 RILPQ96NA2 401 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms