RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 EGLN2Q96KS0 407 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 PPP3R2Q96LZ3 170 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 TSSK3Q96PN8 268 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 CCT7Q99832 543 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 ZNF552Q9H707 407 aaPredicted RBP13.46□□□□□ -0.25
HLA-F-229ENST00000489502 MYNNQ9NPC7 610 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 SLCO1B3Q9NPD5 702 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 PTGFRNQ9P2B2 879 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 VTI1BQ9UEU0 232 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 CES1P1Q9UKY3 287 aa13.46□□□□□ -0.25
HLA-F-229ENST00000489502 PCDHGA9Q9Y5G4 932 aaKnown RBP13.46□□□□□ -0.25
HLA-F-229ENST00000489502 TRBV11-1A0A0K0K1C0 115 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 HRKO00198 91 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 ERAL1O75616 437 aaKnown RBP13.45□□□□□ -0.26
HLA-F-229ENST00000489502 LRATO95237 230 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 PRB1P04280 392 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 TNNI3P19429 210 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 PIK3R1P27986 724 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 SOX8P57073 446 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 TERF2Q15554 542 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 COLEC12Q5KU26 742 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 C6orf136Q5SQH8 315 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 FAM71E1Q6IPT2 247 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 FAM47EQ6ZV65 393 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 MAVSQ7Z434 540 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 KIRREL3Q8IZU9 778 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 TMEM132CQ8N3T6 1108 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF321PQ8N8H1 164 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 FNDC5Q8NAU1 212 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 B3GNT7Q8NFL0 401 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 OR4K14Q8NGD5 310 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 OR14A16Q8NHC5 309 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 FAM76AQ8TAV0 307 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 PTPMT1Q8WUK0 201 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-229ENST00000489502 PSMF1Q92530 271 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 METTL2AQ96IZ6 378 aaKnown RBP13.45□□□□□ -0.26
HLA-F-229ENST00000489502 OR8D2Q9GZM6 311 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 KCNK13Q9HB14 408 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 ZBTB20Q9HC78 741 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-229ENST00000489502 MMP25Q9NPA2 562 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 MED4Q9NPJ6 270 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 PFDN4Q9NQP4 134 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 TUBD1Q9UJT1 453 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 ZNF223Q9UK11 482 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-229ENST00000489502 UTS2RQ9UKP6 389 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 G3BP2Q9UN86 482 aaKnown RBP13.45□□□□□ -0.26
HLA-F-229ENST00000489502 CLCA3PQ9Y6N3 262 aa13.45□□□□□ -0.26
HLA-F-229ENST00000489502 COL6A6A6NMZ7 2263 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 SDHDO14521 159 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 AKAP10O43572 662 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 DDAH2O95865 285 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 BCKDHAP12694 445 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 CPMP14384 443 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 COX7A2P14406 83 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 DRD2P14416 443 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 FEN1P39748 380 aaKnown RBP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 ST13P50502 369 aaKnown RBP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 XKP51811 444 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 C2orf80Q0P641 193 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 PRSS53Q2L4Q9 553 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 SOWAHCQ53LP3 525 aaPredicted RBP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 ANKRD26P1Q6NSI1 321 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 TCTN3Q6NUS6 607 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 LINC00696Q6ZRV3 163 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 ASB18Q6ZVZ8 466 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 TICAM1Q8IUC6 712 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 WDR75Q8IWA0 830 aaKnown RBP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 HOMEZQ8IX15 550 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 ST13P4Q8IZP2 240 aaPredicted RBP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 LIX1Q8N485 282 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 APCDD1LQ8NCL9 501 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 M1APQ8TC57 530 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 SLC2A12Q8TD20 617 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 CKAP2Q8WWK9 683 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 SLC39A7Q92504 469 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 CNRIP1Q96F85 164 aaPredicted RBP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 WBP1Q96G27 269 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 CNPPD1Q9BV87 410 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 AKTIPQ9H8T0 292 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 BAIAP2L1Q9UHR4 511 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 EXO1Q9UQ84 846 aaKnown RBP13.44□□□□□ -0.26
HLA-F-229ENST00000489502 TMED5Q9Y3A6 229 aa13.44□□□□□ -0.26
HLA-F-229ENST00000489502 GOLGA8QA0A0J9YX86 632 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 GOLGA8OA6NCC3 632 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 SYNDIG1LA6NDD5 238 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 A8MUI8 341 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 GOLGA8NF8WBI6 632 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 HDAC3O15379 428 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 ATP8B1O43520 1251 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 MAN1A2O60476 641 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 ALPPP05187 535 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 SLC35E2P0CK97 266 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 ICAM2P13598 275 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 DDCP20711 480 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 MAPK1P28482 360 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 SOX11P35716 441 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 GSTM5P46439 218 aa13.43□□□□□ -0.26
HLA-F-229ENST00000489502 CD97P48960 835 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms