RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MTMR11A4FU01 709 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SRRM4A7MD48 611 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SUPT3HB4E1H0 165 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PRR23D1E9PI22 279 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 UBE2Q2LH0YL09 131 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF701M0R085 212 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 TULP2O00295 520 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF197O14709 1029 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 RNF13O43567 381 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 NDUFS7O75251 213 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GRAP2O75791 330 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PAPSS2O95340 614 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 TSPAN12O95859 305 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 TGM6O95932 706 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 HPRP00739 348 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 HIST1H2AGP0C0S8 130 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CCDC172P0C7W6 258 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PRR23D2P0DMB1 279 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GP1BBP13224 206 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CYP11B1P15538 503 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GCFC2P16383 781 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GPD1P21695 349 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ANXA13P27216 316 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GJB2P29033 226 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 NAMPTP43490 491 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 RPS5P46782 204 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CCT3P49368 545 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CSNK1EP49674 416 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GEMP55040 296 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MAP3K7CLP57077 242 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 TMPRSS3P57727 454 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SEC61BP60468 96 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PPIAP62937 165 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PDE1BQ01064 536 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 NAAAQ02083 359 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 KLC1Q07866 573 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SLC20A2Q08357 652 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MFGE8Q08431 387 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PJVKQ0ZLH3 352 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 NFATC2Q13469 925 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GPR50Q13585 617 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MEF2DQ14814 521 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 P2RY14Q15391 338 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CHRNA6Q15825 494 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CAMK4Q16566 473 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ACSF3Q4G176 576 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 FSCBQ5H9T9 825 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 FAM76BQ5HYJ3 339 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 LIPJQ5W064 366 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM225Q6GV28 225 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 TTC27Q6P3X3 843 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 BLOC1S2Q6QNY1 142 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CEACAM20Q6UY09 585 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 NLRP9Q7RTR0 991 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 C16orf62Q7Z3J2 963 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 VPS36Q86VN1 386 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 CROCCP3Q8IVE0 287 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MYOCDQ8IZQ8 938 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MUC20Q8N307 709 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PRSS35Q8N3Z0 413 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GTPBP8Q8N3Z3 284 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SYT14Q8NB59 555 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 OR6M1Q8NGM8 313 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 KCNG3Q8TAE7 436 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PAQR8Q8TEZ7 354 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SLC35F5Q8WV83 523 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 IRGQQ8WZA9 623 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 FAM3CQ92520 227 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 RND1Q92730 232 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 HIST1H2ACQ93077 130 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 EME1Q96AY2 570 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MSANTD3Q96H12 275 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 RBM41Q96IZ5 413 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ARL5BQ96KC2 179 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 INPP4AQ96PE3 977 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 OR1F2PQ96R84 312 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 KRT12Q99456 494 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 WDR77Q9BQA1 342 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 WACQ9BTA9 647 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SF3B5Q9BWJ5 86 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ANKRD60Q9BZ19 345 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 STRADBQ9C0K7 418 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 RIMS4Q9H426 269 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 C8orf33Q9H7E9 229 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 GEMIN7Q9H840 131 aaKnown RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MAP6D1Q9H9H5 199 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 RAB18Q9NP72 206 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 SLC52A3Q9NQ40 469 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 LZTFL1Q9NQ48 299 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 UFSP2Q9NUQ7 469 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MIOSQ9NXC5 875 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PDP1Q9P0J1 537 aaPredicted RBP3.09□□□□□ -1.91
PRPF4-203ENST00000488937 EPHA6Q9UF33 1036 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 MIOXQ9UGB7 285 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF580Q9UK33 172 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 PILRAQ9UKJ1 303 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 ZHX2Q9Y6X8 837 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 UMODL1Q5DID0 1318 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms