RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 ITGA3P26006 1051 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 MDH1P40925 334 aaKnown RBP14.93□□□□□ -0.02
HDAC7-224ENST00000488927 XKP51811 444 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 POLE2P56282 527 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 SLC26A5P58743 744 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 ID2Q02363 134 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 BTBD16Q32M84 506 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 C6orf163Q5TEZ5 329 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 IL23RQ5VWK5 629 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 CPZQ66K79 652 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 FAM47EQ6ZV65 393 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 LARP4Q71RC2 724 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC7-224ENST00000488927 SPATA19Q7Z5L4 167 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 LIX1Q8N485 282 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 MORN4Q8NDC4 146 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 ACTRT2Q8TDY3 377 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 TTC9Q92623 222 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 MTERF3Q96E29 417 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 WBP1Q96G27 269 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 MAELQ96JY0 434 aaKnown RBP14.93□□□□□ -0.02
HDAC7-224ENST00000488927 ART5Q96L15 291 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 TSSK3Q96PN8 268 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 C1orf50Q9BV19 199 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 LHPPQ9H008 270 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 MMP25Q9NPA2 562 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 TAS2R7Q9NYW3 318 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 HEY2Q9UBP5 337 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 GIMAP2Q9UG22 337 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 PPIEQ9UNP9 301 aaKnown RBP14.93□□□□□ -0.02
HDAC7-224ENST00000488927 ENTPD4Q9Y227 616 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 CCDC88CQ9P219 2028 aa14.93□□□□□ -0.02
HDAC7-224ENST00000488927 TBX19O60806 448 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 EDF1O60869 148 aaKnown RBP14.92□□□□□ -0.02
HDAC7-224ENST00000488927 ERAL1O75616 437 aaKnown RBP14.92□□□□□ -0.02
HDAC7-224ENST00000488927 CEACAM4O75871 244 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 ALPPP05187 535 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 SFTPCP11686 197 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 CPMP14384 443 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 TACR1P25103 407 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 HPCAL1P37235 193 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 CCL11P51671 97 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 GUCY1A3Q02108 690 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 CHAF1BQ13112 559 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 MYBPC3Q14896 1274 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 EPGNQ6UW88 154 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 ACAD11Q709F0 780 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 LRRC25Q8N386 305 aaPredicted RBP14.92□□□□□ -0.02
HDAC7-224ENST00000488927 NATD1Q8N6N6 113 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 B3GNT7Q8NFL0 401 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 CEP70Q8NHQ1 597 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 STON2Q8WXE9 905 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 THOC3Q96J01 351 aaKnown RBP14.92□□□□□ -0.02
HDAC7-224ENST00000488927 PRPF18Q99633 342 aaKnown RBP14.92□□□□□ -0.02
HDAC7-224ENST00000488927 REEP4Q9H6H4 257 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 SLC35C2Q9NQQ7 365 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 LHX6Q9UPM6 363 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 PCDHGB7Q9Y5F8 929 aa14.92□□□□□ -0.02
HDAC7-224ENST00000488927 PCDHGA9Q9Y5G4 932 aaKnown RBP14.92□□□□□ -0.02
HDAC7-224ENST00000488927 WASHC1A8K0Z3 465 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 A8MUA0 341 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 C17orf105B2RV13 164 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 ZNF195O14628 629 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 DIAPH2O60879 1101 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 ATP1B1P05026 303 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 PRPS1L1P21108 318 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 EPHA3P29320 983 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 C21orf58P58505 322 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 Q0VFX4 171 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 CEBPEQ15744 281 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 SPRED3Q2MJR0 410 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 NXNQ6DKJ4 435 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 TICAM1Q8IUC6 712 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 MMP21Q8N119 569 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 NFAM1Q8NET5 270 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-224ENST00000488927 PTPMT1Q8WUK0 201 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-224ENST00000488927 RIT1Q92963 219 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 UCN3Q969E3 161 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 EXOSC8Q96B26 276 aaKnown RBP14.91□□□□□ -0.02
HDAC7-224ENST00000488927 VMP1Q96GC9 406 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 EGLN2Q96KS0 407 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 SLC25A23Q9BV35 468 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 TRIM55Q9BYV6 548 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 WDR55Q9H6Y2 383 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-224ENST00000488927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.91□□□□□ -0.02
HDAC7-224ENST00000488927 GPR83Q9NYM4 423 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 C5AR2Q9P296 337 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 COPS7AQ9UBW8 275 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 BAIAP2L1Q9UHR4 511 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 TEKT2Q9UIF3 430 aa14.91□□□□□ -0.02
HDAC7-224ENST00000488927 GOLGA8QA0A0J9YX86 632 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 GOLGA8OA6NCC3 632 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 GOLGA8NF8WBI6 632 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 POLR3GO15318 223 aaPredicted RBP14.9□□□□□ -0.02
HDAC7-224ENST00000488927 DNAJB5O75953 348 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 SLITRK5O94991 958 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 G6PDP11413 515 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 NTSP30990 170 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 MPIP34949 423 aa14.9□□□□□ -0.02
HDAC7-224ENST00000488927 FEN1P39748 380 aaKnown RBP14.9□□□□□ -0.02
HDAC7-224ENST00000488927 CLCN2P51788 898 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms