RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SH2D4BQ5SQS7 431 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 C6orf163Q5TEZ5 329 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 HHATQ5VTY9 493 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 GALNT18Q6P9A2 607 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 HSDL2Q6YN16 418 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 BEST3Q8N1M1 668 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 CATSPER1Q8NEC5 780 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 OR1N1Q8NGS0 311 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 FAM76AQ8TAV0 307 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 PPWD1Q96BP3 646 aaKnown RBP14.04□□□□□ -0.16
CXCL12-207ENST00000488591 METTL2AQ96IZ6 378 aaKnown RBP14.04□□□□□ -0.16
CXCL12-207ENST00000488591 PKNOX2Q96KN3 472 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 PAIP2Q9BPZ3 127 aaKnown RBP14.04□□□□□ -0.16
CXCL12-207ENST00000488591 UTP23Q9BRU9 249 aaKnown RBP14.04□□□□□ -0.16
CXCL12-207ENST00000488591 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.16
CXCL12-207ENST00000488591 LUZP4Q9P127 313 aa14.04□□□□□ -0.16
CXCL12-207ENST00000488591 TRAV17A0A0B4J275 112 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 WASHC1A8K0Z3 465 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 TMEM114B3SHH9 223 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 J3QKU1 62 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 SEC22BO75396 215 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 SNUPNO95149 360 aaKnown RBP14.03□□□□□ -0.16
CXCL12-207ENST00000488591 HSPA4LO95757 839 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 F10P00742 488 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 SERPINE1P05121 402 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 DRD2P14416 443 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 GRK2P25098 689 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 ALDH9A1P49189 494 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 GPR143P51810 404 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 XKP51811 444 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 MLLT10P55197 1068 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 MLF1P58340 268 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 MAGOHP61326 146 aaKnown RBP14.03□□□□□ -0.16
CXCL12-207ENST00000488591 HEPACAMQ14CZ8 416 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 CHI3L2Q15782 390 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 SLC48A1Q6P1K1 146 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 RNF165Q6ZSG1 346 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 HDXQ7Z353 690 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 DDIASQ8IXT1 998 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 HORMAD2Q8N7B1 307 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 ANKRD42Q8N9B4 389 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 Q8NA96 180 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 OR5L2Q8NGL0 311 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 CPT1CQ8TCG5 803 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 SLC2A12Q8TD20 617 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 RIT1Q92963 219 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 UCN3Q969E3 161 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 PFDN4Q9NQP4 134 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 NKIRAS1Q9NYS0 192 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 MAP10Q9P2G4 905 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 DLGAP4Q9Y2H0 992 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 WBP11Q9Y2W2 641 aaKnown RBP14.03□□□□□ -0.16
CXCL12-207ENST00000488591 CSAG2Q9Y5P2 127 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 DNAJC15Q9Y5T4 150 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 ZNF780BQ9Y6R6 833 aa14.03□□□□□ -0.16
CXCL12-207ENST00000488591 CPAMD8Q8IZJ3 1885 aa14.02□□□□□ -0.16
CXCL12-207ENST00000488591 TMEM120BA0PK00 339 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 GABRR3A8MPY1 467 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 ERAL1O75616 437 aaKnown RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 DDAH2O95865 285 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 IL3P08700 152 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 LINC00032P0C843 101 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 DHRS4L1P0CG22 281 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 PORP16435 677 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 CSNK2A2P19784 350 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 PRPH2P23942 346 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 SLC18A1P54219 525 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 RAE1P78406 368 aaKnown RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 OC90Q02509 493 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF763Q0D2J5 394 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 MPP2Q14168 576 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 INPP5JQ15735 1006 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 GOLGA6L1Q8N7Z2 621 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 OR6Y1Q8NGX8 325 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 OR8K3Q8NH51 312 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 AGR3Q8TD06 166 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 C16orf78Q8WTQ4 265 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 THAP3Q8WTV1 239 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 TWIST2Q8WVJ9 160 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 KLHL29Q96CT2 875 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 SENP5Q96HI0 755 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-207ENST00000488591 CCT7Q99832 543 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 EBPLQ9BY08 206 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 LRTM1Q9HBL6 345 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 C1orf109Q9NX04 203 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 PCDHGA10Q9Y5H3 936 aa14.02□□□□□ -0.17
CXCL12-207ENST00000488591 MAN1A2O60476 641 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 PRAMEF2O60811 474 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 CPMP14384 443 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 NT5EP21589 574 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 CD96P40200 585 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 ABCE1P61221 599 aaKnown RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 STX3Q13277 289 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 TUBA3CQ13748 450 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF267Q14586 743 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 NR6A1Q15406 480 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 SPRED3Q2MJR0 410 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 AGBL2Q5U5Z8 902 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 NOXRED1Q6NXP6 359 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms